Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_N15
(778 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomy... 286 3e-78
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 140 2e-34
SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyc... 134 1e-32
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 132 7e-32
SPCC1795.04c |||20S proteasome component alpha 7|Schizosaccharom... 130 3e-31
SPAC6G10.04c |||20S proteasome component alpha 6 subunit Pre5|Sc... 101 9e-23
SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyc... 101 9e-23
SPAC4A8.13c |pts1||20S proteasome component beta 5|Schizosacchar... 62 1e-10
SPAC23D3.07 |pup1||20S proteasome component beta 2|Schizosacchar... 45 1e-05
SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyc... 44 2e-05
SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces ... 27 2.3
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 27 4.0
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 27 4.0
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 26 5.2
SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor Vma6|S... 26 5.2
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 6.9
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 26 6.9
>SPAC323.02c |||20S proteasome component alpha 5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 286 bits (701), Expect = 3e-78
Identities = 134/211 (63%), Positives = 167/211 (79%)
Frame = +2
Query: 143 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME 322
MF+TRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIG+ T + VVL VEKR+TS LME
Sbjct: 1 MFMTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLME 60
Query: 323 PTTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLA 502
++EK+ E+D HI CA+SGL AD+RT++E ARV+ QNH F Y+E +ES Q++ +LA
Sbjct: 61 SHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLA 120
Query: 503 IQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAXQ 682
++FG+ +D MSRPFGVA++ AGIDE GPQL+H +PSGT+ +Y+AKAIGSGSE A
Sbjct: 121 LRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKS 180
Query: 683 SLKEIYHKSMTLKEAIKSALTILXQVMEEKL 775
L + +HK MTL+EA L +L QVMEEKL
Sbjct: 181 ELVKEFHKDMTLEEAEVLILKVLRQVMEEKL 211
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 140 bits (339), Expect = 2e-34
Identities = 75/207 (36%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Frame = +2
Query: 161 EYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEK 340
+Y + TFSP G+L Q+EYA+ A+ G T++GI ++GVVLA EK+ TS L ++EK
Sbjct: 4 KYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEK 63
Query: 341 IVEVDRHIACAVSGLMADSRTLVERARVECQNHW-FVYNERMSVESCAQAVSNLAIQFGD 517
+ + I SG+ D R LV+++R Q + +YNE + Q ++++ +
Sbjct: 64 VCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASV---MQE 120
Query: 518 SDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAXQSLKEI 697
S G RPFGV+++ AG+DEKGP L+ +DPSGT+ + A AIG S A L++
Sbjct: 121 STQSGGV---RPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKR 177
Query: 698 YHKSMTLKEAIKSALTILXQVMEEKLS 778
Y+ + L +A+ +A+ L + E +L+
Sbjct: 178 YNDELELDDAVHTAILALKETFEGELT 204
>SPBC106.16 |||20S proteasome component alpha 4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 259
Score = 134 bits (325), Expect = 1e-32
Identities = 72/205 (35%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
Frame = +2
Query: 158 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIE 337
S YDR ++ FSP+GRL QVEY EA++ G+TAI + +E +V+ VE++ L + +
Sbjct: 2 SGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQ 61
Query: 338 KIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGD 517
KI VD H+ A +GL AD+R L+++ARVE QNH + +S+E + V+ + ++
Sbjct: 62 KIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQ 121
Query: 518 SDDDSGTAMSRPFGVAVMFAGID--EKGPQLFHMDPSGTFVQYDAKAIGSGSEGAXQSLK 691
S G RPFGV+ + AG D + P+++ +P+G + + A AIG S+ A + L+
Sbjct: 122 S---GGV---RPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLE 175
Query: 692 EIYHKSMTLKEAIKSALTILXQVME 766
+ + + ++ E I A++ L +V++
Sbjct: 176 KNWKEGLSRDETIHLAVSSLLEVVQ 200
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 132 bits (318), Expect = 7e-32
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 2/208 (0%)
Frame = +2
Query: 149 LTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLME-P 325
++RS YD FSPEGRL+QVEYA+EAI A+GI +G+VLA EK++TS L+E
Sbjct: 1 MSRS-YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQE 59
Query: 326 TTIEKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAI 505
+ EK+ + ++ CAV+GL AD+ L+ AR Q + +NE M E + V +L
Sbjct: 60 ESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQ 119
Query: 506 QFGDSDDDSGTAMSRPFGVAVMFAGIDE-KGPQLFHMDPSGTFVQYDAKAIGSGSEGAXQ 682
+ + RPFGV+ ++AG D +G QLF +PSG + + A +IG S
Sbjct: 120 GY------TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQS 173
Query: 683 SLKEIYHKSMTLKEAIKSALTILXQVME 766
+++ Y + L EA A+ L + ++
Sbjct: 174 LMRQEYKDDINLDEASAMAVKFLSKTLD 201
>SPCC1795.04c |||20S proteasome component alpha
7|Schizosaccharomyces pombe|chr 3|||Manual
Length = 253
Score = 130 bits (313), Expect = 3e-31
Identities = 74/203 (36%), Positives = 113/203 (55%)
Frame = +2
Query: 164 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEKI 343
YD G+ FSP+GRLFQ EYA +A++ ST IGI +GV+LA+EK +TS L++P +I
Sbjct: 8 YDLGL-FFSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRI 66
Query: 344 VEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSD 523
VDRHI A +G + D + +V+RAR E + Y + A + N F
Sbjct: 67 GSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLF---- 122
Query: 524 DDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAXQSLKEIYH 703
+ + RPFGV A D +GP L+ ++P+G + Y+ A G G + A L+++
Sbjct: 123 --TCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNF 180
Query: 704 KSMTLKEAIKSALTILXQVMEEK 772
S+ +K+A+K A IL +E+
Sbjct: 181 SSLKMKDAVKEAARILYATHDEE 203
>SPAC6G10.04c |||20S proteasome component alpha 6 subunit
Pre5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 101 bits (243), Expect = 9e-23
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 2/207 (0%)
Frame = +2
Query: 155 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTSEGVVLAVEKRITSTLMEPTTI 334
R++YD T+SP+GRL QVEYA+EAIK GS +G+ + VL KR L +
Sbjct: 3 RNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEEL--SSYQ 60
Query: 335 EKIVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFG 514
+K++ +D HI A++GL D+R L + E + ++ + V + +S +A +
Sbjct: 61 KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVR---RLMSKVAEKAQ 117
Query: 515 DSDDDSGTAMSRPFGVAVMFAGIDEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAXQSLKE 694
+ + G RP+GV + G DE GP L PSG ++Y ++GS S+ A ++
Sbjct: 118 INTQEYG---RRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIER 174
Query: 695 IY--HKSMTLKEAIKSALTILXQVMEE 769
+ +E I SAL L + +
Sbjct: 175 NLDTFPDSSREELILSALRALRDTLSK 201
>SPBC646.16 |||20S proteasome component alpha 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 244
Score = 101 bits (243), Expect = 9e-23
Identities = 53/167 (31%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Frame = +2
Query: 164 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGICTSEGVVLAVEKRITSTLMEPTTIEK 340
+DR + FSPEGRL+QVEYA +A G T++G+ + +K++ L++ +T++
Sbjct: 7 FDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVKH 66
Query: 341 IVEVDRHIACAVSGLMADSRTLVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDS 520
+ + + I C ++G +AD+R V RAR E + M + A+ ++N+A
Sbjct: 67 VFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIA------ 120
Query: 521 DDDSGTAMSRPFGVAVMFAGIDEK-GPQLFHMDPSGTFVQYDAKAIG 658
+ A RP GVA+ +D++ GP LF +DP+G ++ Y A + G
Sbjct: 121 QVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAG 167
>SPAC4A8.13c |pts1||20S proteasome component beta
5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 272
Score = 61.7 bits (143), Expect = 1e-10
Identities = 41/164 (25%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Frame = +2
Query: 242 GSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRTLVERA 418
G+T + G+V+ V+ R ++ L+ T++K++E++ ++ ++G AD +
Sbjct: 61 GTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQFWETVL 120
Query: 419 RVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDEKGP 598
+EC+ H E +SV + ++ +SN+ + G +S + M AG + G
Sbjct: 121 GMECRLHQLRNKELISVSAASKILSNITYSY------KGYGLS----MGTMLAGTGKGGT 170
Query: 599 QLFHMDPSGTFVQYDAKAIGSGSEGAXQSLKEIYHKSMTLKEAI 730
L+++D GT ++ D ++GSGS A L Y ++ +EA+
Sbjct: 171 ALYYIDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEAL 214
>SPAC23D3.07 |pup1||20S proteasome component beta
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 45.2 bits (102), Expect = 1e-05
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Frame = +2
Query: 227 EAIKLGSTAIGICTSEGVVLAVEKRITS-TLMEPTTIEKIVEVDRHIACAVSGLMADSRT 403
+A G+T +G+ + +VL + R T+ ++ +K+ + +I CA +G AD+
Sbjct: 30 KATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEF 89
Query: 404 LVERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGI 583
+ + H N + V + + ++ G ++ G
Sbjct: 90 VTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGH-----------IGAYLVLGGY 138
Query: 584 DEKGPQLFHMDPSGTFVQYDAKAIGSGSEGAXQSLKEIYHKSMTLKEAIK 733
D KGP LF + G+ + A+GSGS A L+ Y + EA++
Sbjct: 139 DCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAME 188
>SPBC4C3.10c |||20S proteasome component beta 1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 44.4 bits (100), Expect = 2e-05
Identities = 39/180 (21%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Frame = +2
Query: 233 IKLGSTAIGICTSEGVVLAVEKRIT-STLMEPTTIEKIVEVDRHIACAVSGLMADSRTLV 409
I++G+T + +GV+LA + R T + +K+ ++ +I C SG AD++T+
Sbjct: 21 IRMGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVA 80
Query: 410 ERARVECQNHWFVYNERMSVESCAQAVSNLAIQFGDSDDDSGTAMSRPFGVAVMFAGIDE 589
+ + + + SV + A S + Q ++ AG DE
Sbjct: 81 DLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQ-----------NKNMLSAGLIVAGYDE 129
Query: 590 K-GPQLFHMDPSGTFVQYDAKAIGSGSEGAXQSLKEIYHKSMTLKEAIKSALTILXQVME 766
K G ++ + G+ + GSGS + ++MT +EA++ + ME
Sbjct: 130 KTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAME 189
>SPBC1711.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 2.3
Identities = 25/81 (30%), Positives = 31/81 (38%)
Frame = -1
Query: 442 PVVLTFNSGPFN*GPGVGHQTRNGASDVSIYFNNLFDGRGFHQS*SYPLLYGQNNSLRST 263
P+ L F S F G S +S YF NLF + Y LL G+NN+ +
Sbjct: 148 PLTLRFKS-IFQSGVATQDLDVQWVSSISWYFLNLFGLKSV-----YALLLGENNAASNA 201
Query: 262 NANCSGAKFDSFYGIFHLEQP 200
A F S L QP
Sbjct: 202 TNEMGMAGFSSAAATAQLIQP 222
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 26.6 bits (56), Expect = 4.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -1
Query: 388 HQTRNGASDVSIYFNNLFDGRGFHQS*SYPLLYGQNNSLRSTNANCS 248
H T AS ++ Y N F FH +YP+ + ++ S ST+AN S
Sbjct: 304 HPTHPSASAMN-YMNPCF--LEFHAFFNYPMKFARSRSAYSTSANYS 347
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = -3
Query: 653 WPWHHTAQMYHSGPYETVEGLSHQCLQT*QQHQMAVTWLFR 531
+PW+ T+ + P +V G+S +C + Q A+ L +
Sbjct: 201 FPWNKTSSTFELDPTISVSGMSDECFASIVQKFSAIGGLIK 241
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -2
Query: 576 ANITATPNGRDMAVPLSSSLS-PNCIAKLETA 484
+ +TATP+ + PLSS S PN I+ L T+
Sbjct: 345 STLTATPSSLENLYPLSSRRSVPNLISSLGTS 376
>SPAC23H4.14 |vam6|vps39|guanyl-nucleotide exchange factor
Vma6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 905
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -1
Query: 151 EKHFTITVRLDDTTTLLMRVISQALTXFNLIXIQSKLETQKIKTN 17
EK I V++D TT L+ +IS +L+ + ++ ET ++TN
Sbjct: 483 EKLEKIAVQID-TTLFLIYMISSPALVGSLLRLPNRCETSVVETN 526
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.8 bits (54), Expect = 6.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 671 GAXQSLKEIYHKSMTLKEAIKSALTILXQVMEEK 772
G + +K+IYH +LKE S T++ + E K
Sbjct: 813 GTDKLMKKIYHCEQSLKEKTNSLETLVSEKKELK 846
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 6.9
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 446 QTSGSDIQLGPFQLRSWSRPSDPKRRKRCV 357
+T+ D++ PF L +W P+DPK K +
Sbjct: 12 ETAEIDVKEDPF-LVTWQSPTDPKNPKNWI 40
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,298,041
Number of Sequences: 5004
Number of extensions: 70546
Number of successful extensions: 209
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -