Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_N05
(716 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M83216-2|AAA58420.1| 538|Homo sapiens caldesmon protein. 32 2.4
M83216-1|AAA58419.1| 793|Homo sapiens caldesmon protein. 32 2.4
M64110-1|AAA35636.1| 538|Homo sapiens caldesmon protein. 32 2.4
D90453-1|BAA14419.1| 532|Homo sapiens l-caldesmon II protein. 32 2.4
D90452-1|BAA14418.1| 558|Homo sapiens l-caldesmon I protein. 32 2.4
BC040354-1|AAH40354.1| 538|Homo sapiens caldesmon 1 protein. 32 2.4
AF247820-1|AAF69498.3| 481|Homo sapiens NAG22 protein protein. 32 2.4
AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein. 31 3.1
BC038295-1|AAH38295.1| 426|Homo sapiens MAP2K7 protein protein. 31 4.1
AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J recom... 30 7.2
DQ431183-1|ABD92775.1| 321|Homo sapiens FAM110C protein. 30 9.5
>M83216-2|AAA58420.1| 538|Homo sapiens caldesmon protein.
Length = 538
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 SRLEQHASA-DSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAA 501
SRLEQ+ SA + KP A + L VP+EGV N S +V S PTAA
Sbjct: 422 SRLEQYTSAIEGTKSAKPTKPAASDLPVPAEGV----RNIKSMWEKGNVFSSPTAA 473
>M83216-1|AAA58419.1| 793|Homo sapiens caldesmon protein.
Length = 793
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 SRLEQHASA-DSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAA 501
SRLEQ+ SA + KP A + L VP+EGV N S +V S PTAA
Sbjct: 677 SRLEQYTSAIEGTKSAKPTKPAASDLPVPAEGV----RNIKSMWEKGNVFSSPTAA 728
>M64110-1|AAA35636.1| 538|Homo sapiens caldesmon protein.
Length = 538
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 SRLEQHASA-DSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAA 501
SRLEQ+ SA + KP A + L VP+EGV N S +V S PTAA
Sbjct: 422 SRLEQYTSAIEGTKSAKPTKPAASDLPVPAEGV----RNIKSMWEKGNVFSSPTAA 473
>D90453-1|BAA14419.1| 532|Homo sapiens l-caldesmon II protein.
Length = 532
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 SRLEQHASA-DSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAA 501
SRLEQ+ SA + KP A + L VP+EGV N S +V S PTAA
Sbjct: 416 SRLEQYTSAIEGTKSAKPTKPAASDLPVPAEGV----RNIKSMWEKGNVFSSPTAA 467
>D90452-1|BAA14418.1| 558|Homo sapiens l-caldesmon I protein.
Length = 558
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 SRLEQHASA-DSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAA 501
SRLEQ+ SA + KP A + L VP+EGV N S +V S PTAA
Sbjct: 442 SRLEQYTSAIEGTKSAKPTKPAASDLPVPAEGV----RNIKSMWEKGNVFSSPTAA 493
>BC040354-1|AAH40354.1| 538|Homo sapiens caldesmon 1 protein.
Length = 538
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 SRLEQHASA-DSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAA 501
SRLEQ+ SA + KP A + L VP+EGV N S +V S PTAA
Sbjct: 422 SRLEQYTSAIEGTKSAKPTKPAASDLPVPAEGV----RNIKSMWEKGNVFSSPTAA 473
>AF247820-1|AAF69498.3| 481|Homo sapiens NAG22 protein protein.
Length = 481
Score = 31.9 bits (69), Expect = 2.4
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 SRLEQHASA-DSVNGEKPRVHAQAQLDVPSEGVHRVLENDGSHVSVHDVTSPPTAA 501
SRLEQ+ SA + KP A + L VP+EGV N S +V S PTAA
Sbjct: 422 SRLEQYTSAIEGTKSAKPTKPAASDLPVPAEGV----RNIKSMWEKGNVFSSPTAA 473
>AB002344-1|BAA21572.2| 1682|Homo sapiens KIAA0346 protein.
Length = 1682
Score = 31.5 bits (68), Expect = 3.1
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 4/97 (4%)
Frame = +1
Query: 340 RLEQHASADSVNGEKPRV-HAQAQLDVPSEGVHRVLEN---DGSHVSVHDVTSPPTAAAD 507
R + A DSV G +PR A+A+ VP E RVL N + + + P A
Sbjct: 984 RRHRRACKDSV-GRRPREGRAKAKAKVPKEKSRRVLGNLDLQSEEIQGREKSRPDLGGAS 1042
Query: 508 EVTPKVFHGAARLIQPGSATSAPQGHTAARRALNPAP 618
+ P P + + P ++A AP
Sbjct: 1043 KAKPPTAPAPPSAPAPSAQPTPPSASVPGKKAREEAP 1079
>BC038295-1|AAH38295.1| 426|Homo sapiens MAP2K7 protein protein.
Length = 426
Score = 31.1 bits (67), Expect = 4.1
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -1
Query: 338 DTSSPFAFMASRLWNSTCALPIPAPSPLESAV--FNFSNCSTGKSVL 204
D + P + + +W+ +LP P+PS +E A F + NC T VL
Sbjct: 293 DPTKPDYDIRADVWSLGISLPCPSPSQVELATGQFPYKNCKTDFEVL 339
>AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J
recombination signal sequences binding protein protein.
Length = 2406
Score = 30.3 bits (65), Expect = 7.2
Identities = 25/70 (35%), Positives = 32/70 (45%)
Frame = -2
Query: 247 PFSIFPTAPPANQFYSPRRRSFLNVEPPAHIRPDASS*VSARKSVDESIALYCRGFPRS* 68
P + P APPA + RR+ FL V P+ RP S A K ES S
Sbjct: 1023 PSAPAPVAPPAGEAPPERRKCFL-VRSPSLSRPPESELEVAPKGRQESEEPQPSSSKPSA 1081
Query: 67 RSSENAVSSA 38
+SS + +SSA
Sbjct: 1082 KSSLSQISSA 1091
>DQ431183-1|ABD92775.1| 321|Homo sapiens FAM110C protein.
Length = 321
Score = 29.9 bits (64), Expect = 9.5
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +1
Query: 448 NDGSHVSVHDVTSPPTAAADEVTPKVFHGAARLIQPGSATSAPQG---HTAARRALNPAP 618
++G + V + P AAD TP+ AAR P S +AP G RR L +
Sbjct: 142 DEGKAGNPETVPTTPGPAADPATPETPAPAARSAAPSSVPAAPPGPEPRVVRRRGLQRSQ 201
Query: 619 VNQVEHFSPA 648
+ +S A
Sbjct: 202 SDLSSRYSAA 211
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.312 0.126 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,038,346
Number of Sequences: 237096
Number of extensions: 2301176
Number of successful extensions: 5059
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5054
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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