Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_N05
         (716 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    26   0.31 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   5.0  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   8.8  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 102 IDSSTDFLADTQLLASGLMCAGGSTFRNERRL 197
           ID ST++      L  GL+ + G  +RN R+L
Sbjct: 109 IDKSTEYRFFKPWLGDGLLISTGQKWRNHRKL 140


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -2

Query: 262 LHSNPPFSIFPTAPPANQFYSPRRRSFLNVEPPAHI 155
           +H +P   I    P +     PR++ FL  E PA+I
Sbjct: 626 IHVSPTTYILLKYPISGFDLEPRQKEFLPKEFPANI 661


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 278 PIPAPSPLESAV 243
           P+P+P PL+ A+
Sbjct: 445 PVPSPDPLDLAI 456


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.312    0.126    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,240
Number of Sequences: 438
Number of extensions: 4172
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)