Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_N04
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 33 0.18
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 33 0.18
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 33 0.31
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 33 0.31
U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein ... 31 0.94
AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or cys... 31 0.94
Z50863-6|CAA90739.1| 250|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z50858-7|CAA90725.1| 250|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC024840-2|AAX55682.1| 434|Caenorhabditis elegans Hypothetical ... 28 8.8
AC024840-1|AAF59619.2| 427|Caenorhabditis elegans Hypothetical ... 28 8.8
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 529 DNFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLKKQNPEY 708
++F+ SPL + LAL+++ AA G T+ E+ L E+ FS I L
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGT 91
Query: 709 VLNLGSRIY 735
+N+ + I+
Sbjct: 92 EVNVANHIF 100
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +1
Query: 529 DNFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLKKQNPEY 708
++F+ SPL + LAL+++ AA G T+ E+ L E+ FS I L
Sbjct: 32 ESFVFSPLSIALALSLVHVAAKGETRDEIRKALLNGATDEELEQHFSNISAGLLVAEKGT 91
Query: 709 VLNLGSRIY 735
+N+ + I+
Sbjct: 92 EVNVANHIF 100
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 490 DWTLTKRVAAVSGDNFLISPLGLKLALAILTEAATGNTKLELSSVLG 630
D+ L + ++SPL + L LA++ A G+T+ EL VLG
Sbjct: 10 DFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 32.7 bits (71), Expect = 0.31
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 490 DWTLTKRVAAVSGDNFLISPLGLKLALAILTEAATGNTKLELSSVLG 630
D+ L + ++SPL + L LA++ A G+T+ EL VLG
Sbjct: 10 DFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG 56
>U50301-8|AAB37049.1| 339|Caenorhabditis elegans Serpin protein 8
protein.
Length = 339
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 532 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLK--KQNPE 705
+F+ SP+ + LAL L EAA G T+ ++ L E+ FS + +L K++P+
Sbjct: 25 SFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDGEMVTHFSNVSTALSAMKKDPQ 84
>AY525086-1|AAS13534.1| 199|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 199
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 532 NFLISPLGLKLALAILTEAATGNTKLELSSVLGFALDRREVRIKFSTIIDSLK--KQNPE 705
+F+ SP+ + LAL L EAA G T+ ++ L E+ FS + +L K++P+
Sbjct: 24 SFVFSPIAISLALYSLYEAARGETRSQIHDCLFKNATDGEMVTHFSNVSTALSAMKKDPQ 83
>Z50863-6|CAA90739.1| 250|Caenorhabditis elegans Hypothetical
protein F44A6.5 protein.
Length = 250
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 780 GDRSESLXRQNIVPYVNSAAEIQDVFWILFLKRINNCTEFYSDF 649
GD ESL ++I V + A++ W+LFLK N F++ F
Sbjct: 41 GDPLESLFLKSIRQVVTNYAKVNQAQWVLFLKN-NQLDNFFNCF 83
>Z50858-7|CAA90725.1| 250|Caenorhabditis elegans Hypothetical
protein F44A6.5 protein.
Length = 250
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 780 GDRSESLXRQNIVPYVNSAAEIQDVFWILFLKRINNCTEFYSDF 649
GD ESL ++I V + A++ W+LFLK N F++ F
Sbjct: 41 GDPLESLFLKSIRQVVTNYAKVNQAQWVLFLKN-NQLDNFFNCF 83
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/90 (24%), Positives = 34/90 (37%)
Frame = -1
Query: 629 PSTDDSSNFVLPVAASVSIANANFRPRGEIKKLSPETAATRLVRVQSNLSKFAADGWNSS 450
PST S AS + + G P TA+ V S S + S
Sbjct: 529 PSTTSGSTVSTTPGASTTSGSTQSTTSGPSTSSGPSTASRSTVSTTSGPSTTSGPSTTSG 588
Query: 449 KSQ*SGSTRVSLYGVTATTCR*VSVATAPI 360
S SGST+ + G + T+ + +S + +
Sbjct: 589 PSTTSGSTKSTTSGPSTTSGKNISTVSGKL 618
>AC024840-2|AAX55682.1| 434|Caenorhabditis elegans Hypothetical
protein Y59H11AL.1b protein.
Length = 434
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 789 RLLGDRSESLXRQNIVPYVNSAAEIQDVFWILFLKRINNCTEFYSDFSS 643
+++ DR ES+ + +VP V + + + W+ L IN EFY D +S
Sbjct: 264 KMIVDRHESVKK--LVPMVILISALFALCWLPLLILINVIPEFYPDINS 310
>AC024840-1|AAF59619.2| 427|Caenorhabditis elegans Hypothetical
protein Y59H11AL.1a protein.
Length = 427
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 789 RLLGDRSESLXRQNIVPYVNSAAEIQDVFWILFLKRINNCTEFYSDFSS 643
+++ DR ES+ + +VP V + + + W+ L IN EFY D +S
Sbjct: 264 KMIVDRHESVKK--LVPMVILISALFALCWLPLLILINVIPEFYPDINS 310
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,482,591
Number of Sequences: 27780
Number of extensions: 367745
Number of successful extensions: 1172
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -