Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_N03
         (438 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ...    29   9.3  
X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag...    29   9.3  
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro...    29   9.3  

>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
           pre-pro-von Willebrand factor. ).
          Length = 2813

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -2

Query: 230 KLRWRQPSNARATDSGGKIYMGTERPSLRTCKGTSWGDQ 114
           ++ WR+P         G++Y+    P   TC+  S+ D+
Sbjct: 639 RVAWREPGRCELNCPKGQVYLQCGTPCNLTCRSLSYPDE 677


>X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA
           fragment (5'terminus) for von Willebrand factor (vWF).
           ).
          Length = 1400

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -2

Query: 230 KLRWRQPSNARATDSGGKIYMGTERPSLRTCKGTSWGDQ 114
           ++ WR+P         G++Y+    P   TC+  S+ D+
Sbjct: 639 RVAWREPGRCELNCPKGQVYLQCGTPCNLTCRSLSYPDE 677


>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor
           protein.
          Length = 2813

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 10/39 (25%), Positives = 19/39 (48%)
 Frame = -2

Query: 230 KLRWRQPSNARATDSGGKIYMGTERPSLRTCKGTSWGDQ 114
           ++ WR+P         G++Y+    P   TC+  S+ D+
Sbjct: 639 RVAWREPGRCELNCPKGQVYLQCGTPCNLTCRSLSYPDE 677


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,960,878
Number of Sequences: 237096
Number of extensions: 1300573
Number of successful extensions: 6001
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6001
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)