Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_N02
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical pr... 218 3e-57
AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical ... 213 1e-55
Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical pr... 155 3e-38
Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical pr... 146 1e-35
AF016443-13|AAC24275.2| 333|Caenorhabditis elegans Serpentine r... 32 0.40
Z81474-5|CAB03906.1| 361|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z98877-17|CAB11571.1| 389|Caenorhabditis elegans Hypothetical p... 30 1.6
AL021497-21|CAA16413.1| 389|Caenorhabditis elegans Hypothetical... 30 1.6
AF273823-1|AAG15172.1| 388|Caenorhabditis elegans nuclear recep... 30 1.6
AF273822-1|AAG15171.1| 387|Caenorhabditis elegans nuclear recep... 30 1.6
AF273821-1|AAG15170.1| 383|Caenorhabditis elegans nuclear recep... 30 1.6
AF068709-14|AAC19258.2| 312|Caenorhabditis elegans Serpentine r... 30 2.2
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.9
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z74033-9|CAN99687.1| 228|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z74033-8|CAA98470.1| 218|Caenorhabditis elegans Hypothetical pr... 28 6.6
M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 28 6.6
AC024757-8|AAF59454.2| 215|Caenorhabditis elegans Hypothetical ... 28 8.7
>Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical
protein F35G12.2 protein.
Length = 396
Score = 218 bits (533), Expect = 3e-57
Identities = 116/234 (49%), Positives = 155/234 (66%), Gaps = 5/234 (2%)
Frame = +2
Query: 98 VRGSVNLSSKAAPATLSDFDV-QHKTPVIRKQKLIPKAQYGGRHAVTMLPGGGIGPECMG 274
+R S N+ KA AT + D+ + ++PV++ A+YGGRH VT+LPG GIGPE +
Sbjct: 10 LRSSKNVVQKAFVATSPNSDMLRFRSPVLQTNTT-KLARYGGRHNVTVLPGDGIGPEMLH 68
Query: 275 YVRDIFKYIGAPIDFEVVDIDPTMDNDDDVQYAITTIKRNGVGLKGNIETKSEAAYVTSR 454
+V I + AP+DFEVV++ D +D+ AIT IKRNGV LKGNIETK + SR
Sbjct: 69 HVERILSAVQAPVDFEVVNLTSKEDASEDLAEAITAIKRNGVALKGNIETKFDNPSFVSR 128
Query: 455 NVALRNELDMYAYILNCKSYPGVATRHKDIDVVIIRQNTEGEYAMLEHESVNG----VVE 622
N+ LR +L++YA +L+C + P V +RH ID+VIIR+NTEGEY+ EHE+VN VVE
Sbjct: 129 NLELRRQLNLYANVLHCSTIPTVPSRHTGIDMVIIRENTEGEYSGNEHEAVNAPHPRVVE 188
Query: 623 SMKVVTADNSERVXXXXXXXXXKNGRXKVTTVHKANIMKLSDGLFLETSXRLAK 784
S+KVVT + SE++ K GR KVT VHKANI KL DGLFL+ + +AK
Sbjct: 189 SLKVVTREKSEQITRFAFQFAKKYGRKKVTAVHKANIQKLGDGLFLKVATDIAK 242
>AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical
protein C30F12.7 protein.
Length = 373
Score = 213 bits (520), Expect = 1e-55
Identities = 101/189 (53%), Positives = 133/189 (70%)
Frame = +2
Query: 197 IPKAQYGGRHAVTMLPGGGIGPECMGYVRDIFKYIGAPIDFEVVDIDPTMDNDDDVQYAI 376
+P A+YGGRH V LPG GIGPE + ++R+IF + AP++FE V + ++ D D+ A+
Sbjct: 27 LPLAKYGGRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVSSSL-LDGDMDAAM 85
Query: 377 TTIKRNGVGLKGNIETKSEAAYVTSRNVALRNELDMYAYILNCKSYPGVATRHKDIDVVI 556
I+RNGV +KGNIETK + SRNV LR +LD+YA IL+C + P V TRH ID+V+
Sbjct: 86 LAIERNGVAIKGNIETKHDDPQFNSRNVELRTKLDLYANILHCVTIPTVPTRHSGIDIVL 145
Query: 557 IRQNTEGEYAMLEHESVNGVVESMKVVTADNSERVXXXXXXXXXKNGRXKVTTVHKANIM 736
IR+NTEGEY+ LEHE+V G+VES+K+VT + ER+ NGR KVT VHKANI
Sbjct: 146 IRENTEGEYSGLEHEAVPGIVESIKIVTREKIERISRMAFEYAKANGRKKVTAVHKANIQ 205
Query: 737 KLSDGLFLE 763
KL DGLFL+
Sbjct: 206 KLGDGLFLK 214
>Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical
protein C37E2.1 protein.
Length = 379
Score = 155 bits (377), Expect = 3e-38
Identities = 84/201 (41%), Positives = 118/201 (58%), Gaps = 6/201 (2%)
Frame = +2
Query: 200 PKAQYGGRHAVTMLPGGGIGPECMGYVRDIFKYIGAPIDFEVVDIDPT-MDNDDDVQYAI 376
P + + VT++PG G+GPE + V+DI K G PI+FE + + ++ A+
Sbjct: 35 PPTELNQKLKVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYTRSSSIENAV 94
Query: 377 TTIKRNG-VGLKGNIETKS---EAAYVTSRNVALRNELDMYAYILNCKSYPGVATRH-KD 541
+I RN V LKG IE + + N+ LR LD++A +++ K+ G+ TRH K
Sbjct: 95 ESIGRNNNVALKGAIEESAVLHTEGELQGLNMRLRRSLDLFANVVHIKTLDGIKTRHGKQ 154
Query: 542 IDVVIIRQNTEGEYAMLEHESVNGVVESMKVVTADNSERVXXXXXXXXXKNGRXKVTTVH 721
+D VI+R+ TEGEY+ LEHE V GV+E +K+ T +ER+ K GR KVT VH
Sbjct: 155 LDFVIVREQTEGEYSSLEHELVPGVIECLKISTRTKAERIAKFAFDYATKTGRKKVTAVH 214
Query: 722 KANIMKLSDGLFLETSXRLAK 784
KANIMKL DGLFL T +AK
Sbjct: 215 KANIMKLGDGLFLRTCEGVAK 235
>Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical
protein F43G9.1 protein.
Length = 358
Score = 146 bits (355), Expect = 1e-35
Identities = 81/185 (43%), Positives = 109/185 (58%), Gaps = 3/185 (1%)
Frame = +2
Query: 215 GGRHAVTMLPGGGIGPECMGYVRDIFKYIGAPIDFEVVDIDPTMDNDDDVQY---AITTI 385
G VT++PG GIGPE V+ IF+ API ++ VD+ P D + I +
Sbjct: 22 GDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPVDVTPVKGRDGVFRIPSRCIELM 81
Query: 386 KRNGVGLKGNIETKSEAAYVTSRNVALRNELDMYAYILNCKSYPGVATRHKDIDVVIIRQ 565
N VGLKG +ET + S N+A+R E +YA + C+S G T + ++DVV IR+
Sbjct: 82 HANKVGLKGPLETPIGKGH-RSLNLAVRKEFSLYANVRPCRSLEGHKTLYDNVDVVTIRE 140
Query: 566 NTEGEYAMLEHESVNGVVESMKVVTADNSERVXXXXXXXXXKNGRXKVTTVHKANIMKLS 745
NTEGEY+ +EHE V GVV+S+K++T S V +NGR VT VHKANIM+ S
Sbjct: 141 NTEGEYSGIEHEIVPGVVQSIKLITETASRNVASFAFEYARQNGRKVVTAVHKANIMRQS 200
Query: 746 DGLFL 760
DGLFL
Sbjct: 201 DGLFL 205
>AF016443-13|AAC24275.2| 333|Caenorhabditis elegans Serpentine
receptor, class h protein190 protein.
Length = 333
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 260 PECMGYVRDIFKYIGAPIDFEVVDI 334
PE GY IFKY AP+++ VV++
Sbjct: 79 PELAGYPLGIFKYFNAPVEYYVVEV 103
>Z81474-5|CAB03906.1| 361|Caenorhabditis elegans Hypothetical
protein C18D4.9 protein.
Length = 361
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/122 (22%), Positives = 47/122 (38%)
Frame = -1
Query: 393 FLLMVVIAYWTSSSLSIVGSMSTTSKSIGAPMYLNMSRTYPMHSGPIPPPGSMVTA*RPP 214
FL+M V+ S + I M T + + + ++ Y + MV RP
Sbjct: 218 FLIMNVLISLLSPIIYIPIMMKTRENRMYSQQHAHL-HNYVFWQSILVVSSKMVIKIRPK 276
Query: 213 YCALGISFCFLITGVLCWTSKSDNVAGAAFELRFTDPRTSGKTFNLVNKRTAILNFELKT 34
C + F + ++ T ++G + FT P ++ N+ NF+LKT
Sbjct: 277 LCLVTFCFKIALPYIIRNTKIQHIISGISINDGFTTPLIIQLSYLWCNRHILFKNFKLKT 336
Query: 33 AV 28
V
Sbjct: 337 FV 338
>Z98877-17|CAB11571.1| 389|Caenorhabditis elegans Hypothetical
protein Y51A2D.17 protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 455 NVALRNELDMYA-YILNCKSYPGVATRHKDIDVVIIR 562
N+ E D+ A +ILN SYPG A HKD +++ R
Sbjct: 175 NIVSSKECDLVADWILN--SYPGFADLHKDQKIILFR 209
>AL021497-21|CAA16413.1| 389|Caenorhabditis elegans Hypothetical
protein Y51A2D.17 protein.
Length = 389
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 455 NVALRNELDMYA-YILNCKSYPGVATRHKDIDVVIIR 562
N+ E D+ A +ILN SYPG A HKD +++ R
Sbjct: 175 NIVSSKECDLVADWILN--SYPGFADLHKDQKIILFR 209
>AF273823-1|AAG15172.1| 388|Caenorhabditis elegans nuclear receptor
NHR-70 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 455 NVALRNELDMYA-YILNCKSYPGVATRHKDIDVVIIR 562
N+ E D+ A +ILN SYPG A HKD +++ R
Sbjct: 174 NIVSSKECDLVADWILN--SYPGFADLHKDQKIILFR 208
>AF273822-1|AAG15171.1| 387|Caenorhabditis elegans nuclear receptor
NHR-70 protein.
Length = 387
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 455 NVALRNELDMYA-YILNCKSYPGVATRHKDIDVVIIR 562
N+ E D+ A +ILN SYPG A HKD +++ R
Sbjct: 173 NIVSSKECDLVADWILN--SYPGFADLHKDQKIILFR 207
>AF273821-1|AAG15170.1| 383|Caenorhabditis elegans nuclear receptor
NHR-70 protein.
Length = 383
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 455 NVALRNELDMYA-YILNCKSYPGVATRHKDIDVVIIR 562
N+ E D+ A +ILN SYPG A HKD +++ R
Sbjct: 169 NIVSSKECDLVADWILN--SYPGFADLHKDQKIILFR 203
>AF068709-14|AAC19258.2| 312|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 61 protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 204 LGISFCFLITGVLCWT 157
+ +++CFL G+LCWT
Sbjct: 228 IALTYCFLYAGILCWT 243
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 2.9
Identities = 28/85 (32%), Positives = 39/85 (45%)
Frame = -1
Query: 480 SSSFLRATLRDVT*AASLLVSMLPFSPTPFLLMVVIAYWTSSSLSIVGSMSTTSKSIGAP 301
SS+ + T+ T S L L SPTP +V++ +S S S V + + T + G P
Sbjct: 434 SSTIVSTTITPSTPKVSTLT--LSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVP 491
Query: 300 MYLNMSRTYPMHSGPIPPPGSMVTA 226
+ T P S P P S VTA
Sbjct: 492 TSTSNQPT-PSTSNPTTPK-STVTA 514
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -1
Query: 657 LSELSAVTTFIDSTTPFTDSCSNIAYSPS 571
++ S+ TTF+ +TTP + + SNI+ + S
Sbjct: 159 IANCSSTTTFLSTTTPVSSTTSNISLTSS 187
>Z74033-9|CAN99687.1| 228|Caenorhabditis elegans Hypothetical
protein F38B7.2b protein.
Length = 228
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/91 (24%), Positives = 32/91 (35%)
Frame = -1
Query: 483 MSSSFLRATLRDVT*AASLLVSMLPFSPTPFLLMVVIAYWTSSSLSIVGSMSTTSKSIGA 304
M S F R + F P FLL+ + +W + + M +
Sbjct: 119 MKSLFYRCHFAQTCMGLECKIDSRLFVPPIFLLIFISIFWCFKRM-LRRDMKRVERQTSF 177
Query: 303 PMYLNMSRTYPMHSGPIPPPGSMVTA*RPPY 211
+ M T P H P PP + +A PPY
Sbjct: 178 HI---MDPTNPAHRSPPPPYNAQNSAIPPPY 205
>Z74033-8|CAA98470.1| 218|Caenorhabditis elegans Hypothetical
protein F38B7.2a protein.
Length = 218
Score = 28.3 bits (60), Expect = 6.6
Identities = 22/91 (24%), Positives = 32/91 (35%)
Frame = -1
Query: 483 MSSSFLRATLRDVT*AASLLVSMLPFSPTPFLLMVVIAYWTSSSLSIVGSMSTTSKSIGA 304
M S F R + F P FLL+ + +W + + M +
Sbjct: 109 MKSLFYRCHFAQTCMGLECKIDSRLFVPPIFLLIFISIFWCFKRM-LRRDMKRVERQTSF 167
Query: 303 PMYLNMSRTYPMHSGPIPPPGSMVTA*RPPY 211
+ M T P H P PP + +A PPY
Sbjct: 168 HI---MDPTNPAHRSPPPPYNAQNSAIPPPY 195
>M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical
protein B0303.7 protein.
Length = 493
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 354 SLSIVGSMSTTSKSIGAPMYLNMSRTYPMHSGPI-PPPGSMVTA*RPPYCALGIS 193
++ I GS+ +++ S P Y + S + S P+ PPP T P Y A IS
Sbjct: 138 NMHIGGSVMSSNSSTATPSYQSNSTSSYSSSAPVAPPPVPRHTQSIPSYSAPAIS 192
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 224 HAVTMLPGGGIGPECMGYVRDIFKYIGAPIDFEVVDIDPTMDNDDDVQ-YAITTIKR 391
H +L G G V+ + IG +D VV++ PT D+D+ +Q Y TTI R
Sbjct: 378 HNEPLLLVGETGVGKTSVVQAVADLIGVTLD--VVNVSPTSDSDELIQGYKPTTIGR 432
>AC024757-8|AAF59454.2| 215|Caenorhabditis elegans Hypothetical
protein Y37E11AL.2 protein.
Length = 215
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = -3
Query: 394 VPLNGRYSILDIIIIVHRWVNVHHFEVNRSTDVFEYVANVSHALRTDTASREHGH 230
VP G + + + + W+N+H + RS VANV + +R HGH
Sbjct: 59 VPAVGSVLSVLLSLFTYEWLNLHFSSMTRSRRACFDVANVLETYQ--PRARTHGH 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,182,959
Number of Sequences: 27780
Number of extensions: 393467
Number of successful extensions: 1047
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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