Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_M19
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 312 2e-85
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 141 5e-34
Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical pr... 128 5e-30
Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical pr... 125 4e-29
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 115 4e-26
AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome al... 110 1e-24
Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical pr... 105 3e-23
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 42 4e-04
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 31 1.0
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 31 1.0
U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal enha... 29 5.3
U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal enha... 29 5.3
AL023828-27|CAI46622.1| 308|Caenorhabditis elegans Hypothetical... 29 5.3
AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal en... 29 5.3
AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical ... 29 5.3
AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine r... 29 5.3
U50308-5|AAG24033.2| 284|Caenorhabditis elegans Seven tm recept... 28 7.1
AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical ... 28 7.1
Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z70755-1|CAA94781.2| 292|Caenorhabditis elegans Hypothetical pr... 28 9.3
AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical ... 28 9.3
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 312 bits (767), Expect = 2e-85
Identities = 151/214 (70%), Positives = 177/214 (82%)
Frame = +3
Query: 135 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 314
MARRYD+RTTIFSPEGRLYQVEYAMEAISHAGT LGIL+++GI++AAER+N +KLLD+
Sbjct: 1 MARRYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSV 60
Query: 315 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 494
+EK+Y+L+D++ C+VAGIT+DAN+L N LR A Y YGE +P EQLV LC+ KQ
Sbjct: 61 MTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQR 120
Query: 495 YTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 674
YTQ GGKRPFGVS+LY+GWDKHYGYQLYQSDPSGNY GWKATCIG+N AAV+ LKQEYK
Sbjct: 121 YTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEYK 180
Query: 675 ENETTLAEAQALAIKVLXKTLDMTKLTPEKVEMA 776
L EA+ LAIKVL KTLD+ KL EKVEMA
Sbjct: 181 --SPNLEEAKQLAIKVLWKTLDV-KLASEKVEMA 211
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 141 bits (342), Expect = 5e-34
Identities = 80/215 (37%), Positives = 119/215 (55%), Gaps = 1/215 (0%)
Frame = +3
Query: 135 MARRYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVF 314
M Y T FSP G+L Q+EYA+ A+ + S+G+ A DG++LA E N +L +
Sbjct: 1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATE--NVGSVLTDD- 57
Query: 315 FSEKIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQA 494
K+ +++ + C +G+ D +L + R IA Y + YGE +P QLV+ + V Q
Sbjct: 58 -QPKVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQE 116
Query: 495 YTQYGGKRPFGVSILYMGWDKHYGYQ-LYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEY 671
YTQ GG RPFG S+L GWDK+ G L+Q DPSG Y WKAT +G N A + L++ +
Sbjct: 117 YTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRF 176
Query: 672 KENETTLAEAQALAIKVLXKTLDMTKLTPEKVEMA 776
E L + A+ L ++ D+ + VE+A
Sbjct: 177 SE-ALELDDGIHTALLTLRESFDV-GMNENNVEVA 209
>Z80215-2|CAB02269.1| 253|Caenorhabditis elegans Hypothetical
protein C36B1.4 protein.
Length = 253
Score = 128 bits (309), Expect = 5e-30
Identities = 66/193 (34%), Positives = 111/193 (57%)
Frame = +3
Query: 144 RYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSE 323
RYD TIFSP+G L+QVEYA EA+ T++G+ D I++ E+++ L D+
Sbjct: 3 RYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTI-R 61
Query: 324 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ 503
KI+ ++D ++ + AG+++DA VL + R+ Q Y L + + + ++ + KQ +TQ
Sbjct: 62 KIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQ 121
Query: 504 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENE 683
G+RPFG+S+L G+D +L++++PSG Y + A G L+++Y E E
Sbjct: 122 SPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSE-E 180
Query: 684 TTLAEAQALAIKV 722
T+ EA L + V
Sbjct: 181 NTVDEATTLKLVV 193
>Z79754-8|CAB02097.1| 248|Caenorhabditis elegans Hypothetical
protein F25H2.9 protein.
Length = 248
Score = 125 bits (301), Expect = 4e-29
Identities = 74/213 (34%), Positives = 120/213 (56%), Gaps = 4/213 (1%)
Frame = +3
Query: 147 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 326
YD FSPEGRL+QVEYA+EA+ TS+GI ++G+LLAAE+R+T+KL+ EK
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAI-EK 66
Query: 327 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAY--- 497
I K++ + + AG+ +D+ L ++ AQ + Y I E + + ++ +
Sbjct: 67 ISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDD 126
Query: 498 -TQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYK 674
+ RPFGV++L+ G D+ G +L+ DPSG + KA IG S A +LK++Y
Sbjct: 127 DVKASMSRPFGVAMLFAGVDQE-GAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQY- 184
Query: 675 ENETTLAEAQALAIKVLXKTLDMTKLTPEKVEM 773
+ T+ E +A+ +L + ++ KL VE+
Sbjct: 185 HDALTIKEGLKMALAILKQVME-EKLNSANVEV 216
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 115 bits (277), Expect = 4e-26
Identities = 64/199 (32%), Positives = 107/199 (53%), Gaps = 2/199 (1%)
Frame = +3
Query: 147 YDTRTTIFSPEGRLYQVEYAMEAISHAG-TSLGILATDGILLAAERRNTNKLLDEVFFSE 323
+D TIFSPEGR+YQVEYA +AI+ T++ + D ++A ++R + L+ +
Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS 68
Query: 324 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ 503
+Y+++ + C G+ DA + A + + G +PCE L + D+ Q YTQ
Sbjct: 69 -VYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQ 127
Query: 504 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEY-KEN 680
R G ++L++ +D G ++Y+ DP+G Y G K +G A S L+++ K++
Sbjct: 128 NAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKS 187
Query: 681 ETTLAEAQALAIKVLXKTL 737
E T EA LAI+ L +L
Sbjct: 188 ELTSTEAIELAIEALQTSL 206
>AF036694-1|AAB88344.1| 260|Caenorhabditis elegans Proteasome alpha
subunit protein 6 protein.
Length = 260
Score = 110 bits (264), Expect = 1e-24
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 1/199 (0%)
Frame = +3
Query: 144 RYDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSE 323
+YD T++SP+GRL+QVEYA+EA+ ++GI + ++ A +R N L +
Sbjct: 5 QYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSH---QK 61
Query: 324 KIYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ 503
K+Y+++ S+AG+ SD +L L+ + Y +++P ++L + QA TQ
Sbjct: 62 KVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQ 121
Query: 504 YGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENE 683
Y G+RPFGV IL G+DK G + Q+DPS T IG S +A + L++ E
Sbjct: 122 YYGRRPFGVGILIAGYDKD-GAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFE 180
Query: 684 TTLAEAQAL-AIKVLXKTL 737
+ E + A+ L TL
Sbjct: 181 KSTPEQLIVHALLALRDTL 199
>Z48544-9|CAA88436.2| 250|Caenorhabditis elegans Hypothetical
protein ZK945.2 protein.
Length = 250
Score = 105 bits (253), Expect = 3e-23
Identities = 60/209 (28%), Positives = 113/209 (54%)
Frame = +3
Query: 147 YDTRTTIFSPEGRLYQVEYAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEK 326
YD + FSP+GR++QVEYA +A+ +AGT + I +G+++ A++ ++KL + + +
Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTD-NANPR 66
Query: 327 IYKLNDDMVCSVAGITSDANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQY 506
++ +ND++ +VAG D L N A ++L Y E +P + + + + + +T
Sbjct: 67 MFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-L 125
Query: 507 GGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENET 686
G RPFG +M W+K G +L+ +PSG +KA +G + AA + + ++ K E
Sbjct: 126 GISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEI-EKLKIEEL 184
Query: 687 TLAEAQALAIKVLXKTLDMTKLTPEKVEM 773
+ + A +++ D K ++EM
Sbjct: 185 DVNQLVKEAARIIMVVRDENKDKNVQIEM 213
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 42.3 bits (95), Expect = 4e-04
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 2/172 (1%)
Frame = +3
Query: 201 YAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFFSEKIYKLNDDMVCSVAGITSD 380
Y E IS T + + G+++ + R + + KI + D+MV +G +D
Sbjct: 15 YPQEEISTGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAAD 74
Query: 381 ANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQ--YGGKRPFGVSILYMGWD 554
+ + + Y + + + + Q + Q Y + S+L GWD
Sbjct: 75 TQAIADIAKYHIDVYTMTENKPVTIYRS-------SQIFRQFLYNYREQLSASVLVAGWD 127
Query: 555 KHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEYKENETTLAEAQAL 710
+ G Q+Y G ++T G+ S L +++ N TL E +A+
Sbjct: 128 EELGGQVYAIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPN-LTLEECKAI 178
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 31.1 bits (67), Expect = 1.0
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 201 YAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFF-SEKIYKLNDDMVCSVAGITS 377
Y+ME G++ I + ++A++ R T ++ + +EKI LND+++ + +G
Sbjct: 47 YSMEG----GSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYG 102
Query: 378 DANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDK 557
D VL +L+ + Q L +Y + V ++ Y P+ + G D+
Sbjct: 103 D--VL--QLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDE 158
Query: 558 HYGYQLYQSDPSG 596
H ++ DP G
Sbjct: 159 HGKGAVFSYDPIG 171
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 31.1 bits (67), Expect = 1.0
Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 201 YAMEAISHAGTSLGILATDGILLAAERRNTNKLLDEVFF-SEKIYKLNDDMVCSVAGITS 377
Y+ME G++ I + ++A++ R T ++ + +EKI LND+++ + +G
Sbjct: 47 YSMEG----GSTCAISGENFAIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYG 102
Query: 378 DANVLTNELRLIAQRYLLQYGESIPCEQLVSWLCDVKQAYTQYGGKRPFGVSILYMGWDK 557
D VL +L+ + Q L +Y + V ++ Y P+ + G D+
Sbjct: 103 D--VL--QLKKVLQSRLHKYRFDYRSDMSVDLCAELLSRNLYYRRFFPYYTGAILAGIDE 158
Query: 558 HYGYQLYQSDPSG 596
H ++ DP G
Sbjct: 159 HGKGAVFSYDPIG 171
>U50199-2|AAP46272.1| 169|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform b protein.
Length = 169
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 480 DVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATC 623
D+ Q T + G + ++Y G Y Y +YQ P N+ W+ C
Sbjct: 49 DIPQIVTSFKGYQ----KLMYQG----YRYNIYQIAPERNFKSWRCVC 88
>U50199-1|AAA91262.1| 427|Caenorhabditis elegans Pharyngeal
enhancer binding protein1, isoform a protein.
Length = 427
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 480 DVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATC 623
D+ Q T + G + ++Y G Y Y +YQ P N+ W+ C
Sbjct: 49 DIPQIVTSFKGYQ----KLMYQG----YRYNIYQIAPERNFKSWRCVC 88
>AL023828-27|CAI46622.1| 308|Caenorhabditis elegans Hypothetical
protein Y17G7B.23 protein.
Length = 308
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
Frame = -2
Query: 776 CHFDFFWSQF-SHIQSLXKYFD-----CQGLCFC 693
CH DF W +F SH +S +Y D G+ FC
Sbjct: 78 CHADFVWDEFASHNESCHQYVDDVTVIKSGIAFC 111
>AF160187-1|AAD42897.1| 425|Caenorhabditis elegans pharyngeal
enhancer binding protein-1 protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 480 DVKQAYTQYGGKRPFGVSILYMGWDKHYGYQLYQSDPSGNYGGWKATC 623
D+ Q T + G + ++Y G Y Y +YQ P N+ W+ C
Sbjct: 47 DIPQIVTSFKGYQ----KLMYQG----YRYNIYQIAPERNFKSWRCVC 86
>AF022983-5|AAK82915.1| 79|Caenorhabditis elegans Hypothetical
protein R13D11.10 protein.
Length = 79
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 546 GWDKHYGYQLYQSDPSGNYGGWKATCIG 629
GW GY Y P G YGGW +G
Sbjct: 38 GWGGRGGYGGYGYRPYGGYGGWGGRGMG 65
>AF022980-10|AAG24193.1| 350|Caenorhabditis elegans Serpentine
receptor, class j protein44 protein.
Length = 350
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 4/28 (14%)
Frame = -1
Query: 648 LLQHYCYRCMLLS----TPHSFHWDQTG 577
L+ H+ YR +++S T H FHW TG
Sbjct: 109 LMSHFIYRYLVISDSSLTRHHFHWFMTG 136
>U50308-5|AAG24033.2| 284|Caenorhabditis elegans Seven tm receptor
protein 94 protein.
Length = 284
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -2
Query: 194 LIQTTFRREYGCTGIITSCHFLYKYILFV 108
+I T+ YG T ++ + HF+Y+YI +
Sbjct: 89 IIIPTYCTSYGLTLVLLAIHFVYRYIAMI 117
>AL023837-3|CAB63348.2| 283|Caenorhabditis elegans Hypothetical
protein Y37H2C.4 protein.
Length = 283
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 209 HSIFDLIQTTFRREYGCTGIITSCHFLYKY 120
H I ++ T + YG + + +CHF+Y+Y
Sbjct: 42 HDITLVLLTVYSSCYGSSMSVFACHFIYRY 71
>Z72505-4|CAA96611.1| 347|Caenorhabditis elegans Hypothetical
protein C50C10.6 protein.
Length = 347
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 227 RMTYSFHSIFDLIQTTFRREYGCTGIITSCHFLYKY 120
R FH I + + +G + I +CHF+Y+Y
Sbjct: 79 RKDQHFHLISQFMAVNYCSFFGFSLAIIACHFIYRY 114
>Z70755-1|CAA94781.2| 292|Caenorhabditis elegans Hypothetical
protein K06A4.1 protein.
Length = 292
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 5/78 (6%)
Frame = +3
Query: 546 GWDKHYGYQLYQSDPSGNYGGWKATCIGNNSAAAVSSLKQEY-----KENETTLAEAQAL 710
G HY +++YQ S GG+ A I + + +V K++Y N TL +
Sbjct: 192 GSASHYNFKIYQRAKSYYMGGYDANSIMHYNFGSVPWQKRDYFSPSDIRNINTLYKCNNR 251
Query: 711 AIKVLXKTLDMTKLTPEK 764
+ T+ T T K
Sbjct: 252 VVSKFPSTIPSTSTTTTK 269
>AL021472-1|CAA16299.2| 397|Caenorhabditis elegans Hypothetical
protein Y17D7B.1 protein.
Length = 397
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = -1
Query: 636 YC--YRCMLLSTPHSFHWDQTGRADNH-SAYPSPYTELRLQRAFYLHIVCKLVSHHKARR 466
YC Y + PH+F G+ + PY EL L +I+C++V ++ RR
Sbjct: 255 YCVDYSHVWSQGPHTFENVFGGKMIRYFDIIVKPYLELNLSETEVTYILCQIVWNYAGRR 314
Query: 465 L 463
L
Sbjct: 315 L 315
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,333,394
Number of Sequences: 27780
Number of extensions: 430686
Number of successful extensions: 1193
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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