Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_M15
(907 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical pr... 132 3e-31
Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical pr... 119 2e-27
Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical pr... 52 7e-07
AC093703-1|AAL00863.3| 346|Caenorhabditis elegans Hypothetical ... 31 1.1
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 31 1.5
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 31 1.5
U80029-6|AAB37586.1| 199|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF016415-9|AAW88416.1| 297|Caenorhabditis elegans Serpentine re... 30 2.0
Z69661-4|CAA93491.1| 238|Caenorhabditis elegans Hypothetical pr... 30 2.6
U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine rece... 29 3.5
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 29 4.6
Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical pr... 29 6.0
AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion transpo... 29 6.0
>Z81037-5|CAB02752.1| 320|Caenorhabditis elegans Hypothetical
protein C17E4.9 protein.
Length = 320
Score = 132 bits (319), Expect = 3e-31
Identities = 76/244 (31%), Positives = 128/244 (52%), Gaps = 5/244 (2%)
Frame = +2
Query: 185 KRFIWNPKTRQFCGRTGSSWSKIALFYFIFYSALAILVAICMWTFLQLLDARQPKWQLER 364
+ F++N K GRTG SW +I +FY IFY+ LA C+ F++ LD + P++ +
Sbjct: 30 REFLYNKKNGTVMGRTGKSWFQIIVFYIIFYAFLAAFWLTCLTIFMKTLDPKVPRFYGKG 89
Query: 365 SIIGTNPGLGFRPTPPE-VASSVIWYKGNDPGSQQFWVKKLSTFLAAYKRDG---KKAGA 532
+IIG NPG+G++P E S++I Y D S + +++++ T+L Y + ++ GA
Sbjct: 90 TIIGVNPGVGYQPWLKERPDSTLIKYNLRDQKSYKAYLEQMKTYLTKYDSNATETRECGA 149
Query: 533 GQNIHNCDFKLPPPAGKVCDVDISAWGP-CVQDNYFGYHKSTPCIFLKLNKIYGWRPKFY 709
G + N D + P A C D+S + C + + FGY PC+ + LN++ GWRP Y
Sbjct: 150 GDS--NDDLEKNPDA-LPCRFDLSVFDKGCSEKSDFGYKSGKPCVIISLNRLIGWRPTDY 206
Query: 710 NSSDNLPKDMPEDLKEHIRNMTAYDKNYLNMVWVSCQGENPXDRXNIGPIQYLPHRGFRG 889
+ +PE++K D+ + ++C+G D+ +IG + Y+P G G
Sbjct: 207 QEN-----SVPEEVK---------DRYKAGSIAINCRGATNVDQEHIGKVTYMPSNGIDG 252
Query: 890 TTSP 901
P
Sbjct: 253 RYYP 256
>Z81550-4|CAB04477.1| 317|Caenorhabditis elegans Hypothetical
protein F55F3.3 protein.
Length = 317
Score = 119 bits (287), Expect = 2e-27
Identities = 68/241 (28%), Positives = 120/241 (49%), Gaps = 3/241 (1%)
Frame = +2
Query: 188 RFIWNPKTRQFCGRTGSSWSKIALFYFIFYSALAILVAICMWTFLQLLDARQPKWQLERS 367
+F++N GRTG+SW +I +FY IFY L+ C+ FL+ LD + P++ + +
Sbjct: 28 QFLYNKDKGTVLGRTGTSWCQITVFYIIFYIFLSAFFIGCLSIFLRTLDPKVPRFYGKGT 87
Query: 368 IIGTNPGLGFRPTPPEVA-SSVIWYKGNDPGSQQFWVKKLSTFLAAYKRDGKKAGAGQNI 544
IIG NPG+G++P E S++I + D S + +VK+L +L+ YK + G +
Sbjct: 88 IIGVNPGVGYQPWLKENPDSTLIKFNLQDSKSWEPYVKQLDNYLSKYKNTNETRDCGASD 147
Query: 545 HNCDFKLPPPAGKVCDVDISAW--GPCVQDNYFGYHKSTPCIFLKLNKIYGWRPKFYNSS 718
+N + C D+ + C + +GY PC+ + LN++ GWRP Y+
Sbjct: 148 NNDALETDTDTFP-CRFDLGLFEKANCGAKDQYGYKSGKPCVAVSLNRLIGWRPVNYDDG 206
Query: 719 DNLPKDMPEDLKEHIRNMTAYDKNYLNMVWVSCQGENPXDRXNIGPIQYLPHRGFRGTTS 898
+PE++K + + ++C+G D+ ++G ++Y+P G G
Sbjct: 207 S-----VPEEIKGRYKP---------GSITINCEGATSFDKEHLGKVKYIPETGIDGRYY 252
Query: 899 P 901
P
Sbjct: 253 P 253
>Z82262-6|CAB05149.1| 374|Caenorhabditis elegans Hypothetical
protein C43F9.6 protein.
Length = 374
Score = 51.6 bits (118), Expect = 7e-07
Identities = 49/179 (27%), Positives = 74/179 (41%), Gaps = 14/179 (7%)
Frame = +2
Query: 257 LFYFIFYSALAILVAICMWTFLQLLDARQPKWQLERSIIGTNPGLGFRPTPPEVASSVIW 436
+F F+ + +L +W LD + P + + S +G P + F P P + +
Sbjct: 108 IFLFVLWGLATMLAIALVWFNFSRLDRQYPIYFGDGSFLGGAPKVSFDPNPRQ------F 161
Query: 437 YKGNDPGSQQFWVKKLSTF---LAAYKRDGKKAGAG---QNIHNCDF--KLPPPAGKVCD 592
+ + + + + ST+ L YK+ KK G Q + + C
Sbjct: 162 LEDGTKNAMSWNIYEFSTYVNYLIRYKQVLKKYSGGIGKQKVKKEEMCKNQTMTRENACK 221
Query: 593 VD-ISAWGPCVQ--DNY---FGYHKSTPCIFLKLNKIYGWRPKFYNSSDNLPKDMPEDL 751
D ++ +G C DN FGY K PCI LKLNKI GW P + S N K DL
Sbjct: 222 FDRLTDFGECTLSLDNLERGFGYSKGQPCIMLKLNKIVGWVPNL-SPSKNKTKCPSGDL 279
>AC093703-1|AAL00863.3| 346|Caenorhabditis elegans Hypothetical
protein Y20F4.3 protein.
Length = 346
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 401 PTPPEVASSVIWYKGNDPGSQQFWVKKLSTFLAAYKRDGKK 523
PTPP+++ + +WY G + ++S F YK++GKK
Sbjct: 30 PTPPDISPNDVWYHGELNEHDANHLLQVS-FAKNYKKNGKK 69
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 321 RNVHMQIATRMASAE*KIK*NNAIFDQLDPVLPQNCLVFGFQMNR 187
R + + AT ++ K+K I DQ++P++ Q+ L QMNR
Sbjct: 220 RKIEVNCATARVHSK-KVKPTGGILDQMNPLMAQSALAAQAQMNR 263
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 321 RNVHMQIATRMASAE*KIK*NNAIFDQLDPVLPQNCLVFGFQMNR 187
R + + AT ++ K+K I DQ++P++ Q+ L QMNR
Sbjct: 220 RKIEVNCATARVHSK-KVKPTGGILDQMNPLMAQSALAAQAQMNR 263
>U80029-6|AAB37586.1| 199|Caenorhabditis elegans Hypothetical
protein T20D4.11 protein.
Length = 199
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 692 WRPKFYNSSDNLPKDMPEDLKEHIRNMTAYDKNYLNMVWVSCQG 823
W+P FY+ ++ P PE+++E +NM D ++V +C G
Sbjct: 135 WKP-FYDLNEVGPDTTPEEMEELCKNMLGKDNCMKDLVGRTCGG 177
>AF016415-9|AAW88416.1| 297|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 36 protein.
Length = 297
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 249 FDQLDPVLPQNCLVFGFQMNR--FTFWDLVRGGSFSL 145
F D +P C VFG MN+ + FW + R FSL
Sbjct: 147 FCSYDMEIPSTCRVFGCAMNKCFYNFWTIHRSVIFSL 183
>Z69661-4|CAA93491.1| 238|Caenorhabditis elegans Hypothetical
protein F48F7.6 protein.
Length = 238
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 130 IQHVLQGEGTTSNQIPKSETVHLEPEDQAVLWKNRI*LV-KNSIVLFYLLLRTRHPSRYL 306
++H+L +G + ++ +SE H E +++ V + LV K S ++ L R + ++
Sbjct: 161 VEHILAKQGRKARRMQRSEYKHAEEDNKGVRQRLAAKLVAKKSEIIERFCLAQR--TVFV 218
Query: 307 HVDVPPAFGR*ATQMA 354
D P +GR T ++
Sbjct: 219 KADCPNVYGRTTTHIS 234
>U80030-3|AAG24160.2| 367|Caenorhabditis elegans Serpentine
receptor, class w protein115 protein.
Length = 367
Score = 29.5 bits (63), Expect = 3.5
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -2
Query: 627 SCTQGPHALMSTSQTFPAGGGSLKSQLWMF 538
SC +GPH + + S F A G L ++F
Sbjct: 193 SCAKGPHHIFAVSDLFTANDGFLAKYFYLF 222
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 659 CIFLKLNKIYGWRPKFYNSSDNLPKDMPEDLKEHIRNMTAYDKNYL 796
CI+ + + W Y++ D K MP DLKE + N T KN L
Sbjct: 349 CIYERRIEALFWAT--YSNIDRNSKYMPPDLKEELENPTTEMKNGL 392
>Z81570-1|CAB04606.1| 749|Caenorhabditis elegans Hypothetical
protein K12G11.1 protein.
Length = 749
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 290 ILVAICMWTFLQLLDARQPKWQLERSIIGT 379
+++++C F +L + PKW L S+ GT
Sbjct: 522 LIISVCFALFTTILREQYPKWHLLASVKGT 551
>AY887910-1|AAX34422.1| 749|Caenorhabditis elegans anion
transporter SULP-4 protein.
Length = 749
Score = 28.7 bits (61), Expect = 6.0
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 290 ILVAICMWTFLQLLDARQPKWQLERSIIGT 379
+++++C F +L + PKW L S+ GT
Sbjct: 522 LIISVCFALFTTILREQYPKWHLLASVKGT 551
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,373,260
Number of Sequences: 27780
Number of extensions: 475396
Number of successful extensions: 1239
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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