Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_M15
(907 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 25 1.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 3.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 6.7
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 6.7
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.7
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.7
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 24.6 bits (51), Expect = 1.3
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 585 SAM*TSARGDLACRTTISATTNRHPASS*S*IRSTVG 695
+A+ + GD +CR T S N PAS+ + T+G
Sbjct: 136 AAVDAATAGDKSCRYTASLAGNVAPASADPMVNYTLG 172
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 53 PLNEFHXTSIKMXVN-QRTSDLTXLXRFNMYYREKE 157
P+NEFH T + V QR +T L ++Y + E
Sbjct: 1538 PINEFHWTLVSNSVKMQRRFVVTNLQPSSVYQLKVE 1573
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 3.8
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 53 PLNEFHXTSIKMXVN-QRTSDLTXLXRFNMYYREKE 157
P+NEFH T + V QR +T L ++Y + E
Sbjct: 1534 PINEFHWTLVSNSVKMQRRFVVTNLQPSSVYQLKVE 1569
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 6.7
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 161 PLTRSQKVKRFIWNPKTRQF 220
P T ++ + +W PK RQF
Sbjct: 410 PSTMERQTQTEVWIPKWRQF 429
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 6.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2
Query: 606 ALMSTSQTFPAGGGSLKS 553
A+ STS ++P GG S S
Sbjct: 75 AITSTSPSYPGGGSSSPS 92
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 161 PLTRSQKVKRFIWNPKTRQFCGRTG 235
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 161 PLTRSQKVKRFIWNPKTRQFCGRTG 235
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 161 PLTRSQKVKRFIWNPKTRQFCGRTG 235
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 161 PLTRSQKVKRFIWNPKTRQFCGRTG 235
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRGIINPEDVMLKRRTG 164
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 161 PLTRSQKVKRFIWNPKTRQFCGRTG 235
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 161 PLTRSQKVKRFIWNPKTRQFCGRTG 235
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 161 PLTRSQKVKRFIWNPKTRQFCGRTG 235
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 6.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 161 PLTRSQKVKRFIWNPKTRQFCGRTG 235
P T S ++KR I NP+ RTG
Sbjct: 140 PTTTSDELKRDIINPEDVMLKRRTG 164
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,420
Number of Sequences: 438
Number of extensions: 6147
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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