Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_M12
         (832 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    27   0.93 
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    26   1.6  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   4.9  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    24   6.5  
Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor prot...    23   8.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.6  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.6  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   8.6  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 26.6 bits (56), Expect = 0.93
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +2

Query: 593 SLTVINIGMYGEENIDHTDVALLIRRLPNLTNLGSYS 703
           SL  + +    EE+IDH+    ++RR P   N G  S
Sbjct: 145 SLRNVEVQAQPEEDIDHSSFVEVVRRKPRGINSGKSS 181


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 155  SMGATTDIFQDLINLILTSEYLDPSVRYYTMKLLLKENIK 274
            S   T D F  L  L   +E + PS   YT++L  K+N K
Sbjct: 1105 SFPRTQDTFVGLKALTKLAEKISPSRNDYTVQLKYKKNTK 1144


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 479 KYIGEHNKVLKLLDVSGETDITEIGIDAMLSGNPQLTQSLTVINIGMYG 625
           KY+ +HN V   LD+    ++ ++ I     G+P   Q  T++ +G +G
Sbjct: 660 KYLAKHNAVFDQLDLVTYEEVVKVPI-----GDPAF-QRRTLVLLGAHG 702


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 160 GRYNRYLPGSYQLNINV 210
           GR  RY  G+ QLNIN+
Sbjct: 356 GRLERYRHGATQLNINL 372


>Z22925-1|CAA80505.1|  211|Anopheles gambiae ANG12 precursor
           protein.
          Length = 211

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 170 TDIFQDLINLILTSEYLDPSVRY 238
           TD F D + L+  ++ LD ++RY
Sbjct: 27  TDDFDDFVGLLPLNDLLDLAMRY 49


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +2

Query: 275 SLATGMFPVPYYRKVIEIIVEQGRHLTSLNLKGV 376
           SLA G FP  + +  +  I ++G    ++N +G+
Sbjct: 587 SLANGYFPKAWRKSWMVPIYKKGDRTDAINYRGI 620


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 6   FENVAKVSGIAVTSNHVVASG 68
           F  V ++ GIAV  NHV+  G
Sbjct: 598 FHFVGRILGIAVFHNHVLDGG 618


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +2

Query: 284 TGMFPVPYYRKVIEIIVEQGR 346
           TG FP+P+ R+ + ++ + G+
Sbjct: 442 TGFFPIPWKRQKLVLLPKPGK 462


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,320
Number of Sequences: 2352
Number of extensions: 16019
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)