Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_M08
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.2  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 371 SSKTCDIKRAFSSCSSMPESGSKLAGPFKPGLEDPP 264
           S+ T   +   +SCSS+P + S  +  + PG    P
Sbjct: 92  SNPTYSSRSVMTSCSSVPTTASYGSDLYFPGATSQP 127


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/50 (28%), Positives = 23/50 (46%)
 Frame = +2

Query: 125 CPL*CRNVVMIIYLLQMTTLKSSFPMTRITTV*IMVVRWTHYPVLTLVDL 274
           C L    ++ +IY LQ   LKS +     T    +   +T+  +LT V +
Sbjct: 49  CLLMVVKILWVIYWLQDDALKSVYASLLCTEKIFLFAIYTNLSILTTVTI 98


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 169 QEVYYHH 149
           QEVYYHH
Sbjct: 61  QEVYYHH 67


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 169 QEVYYHH 149
           QEVYYHH
Sbjct: 61  QEVYYHH 67


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 169 QEVYYHH 149
           QEVYYHH
Sbjct: 61  QEVYYHH 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,694
Number of Sequences: 336
Number of extensions: 2875
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)