Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_M07
(723 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0175 + 32152428-32153423,32153692-32153889,32154942-321551... 154 8e-38
07_03_1271 + 25356087-25356232,25356419-25356543,25356650-253566... 36 0.033
07_01_0379 + 2830475-2830614,2831180-2831304,2831510-2831556,283... 35 0.057
03_06_0215 + 32416097-32416236,32416727-32416851,32417092-324171... 33 0.17
02_05_1232 + 35110891-35111154,35111272-35111448,35111557-351116... 33 0.17
08_02_1054 + 23980962-23981096,23981208-23981420,23983062-239831... 31 0.93
04_04_1206 + 31727931-31728048,31728492-31728538,31728782-317289... 31 0.93
02_02_0188 + 7617838-7620231,7621856-7622071,7622167-7622328,762... 31 0.93
03_01_0240 - 1862699-1864186,1864245-1864442 29 2.8
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 29 4.9
06_01_1066 - 8656108-8657622 28 6.5
09_04_0275 + 16302086-16303721,16304182-16304734,16305491-163055... 28 8.6
08_02_1027 + 23749400-23750698 28 8.6
>03_06_0175 +
32152428-32153423,32153692-32153889,32154942-32155121,
32156224-32156481,32157310-32157381
Length = 567
Score = 154 bits (373), Expect = 8e-38
Identities = 74/134 (55%), Positives = 99/134 (73%), Gaps = 3/134 (2%)
Frame = +1
Query: 100 PIINNDGELVALIARTDLKKARSYPNASKDS---NKQLLVGAAIGTRDTDRERLKLLVNN 270
P++++D E++ LI D+++ RSYP K S + + +V A+IGTR+ D+ RL+ LV
Sbjct: 196 PLVSDDSEVIDLITVNDVERIRSYPKLGKPSLGADGKFVVAASIGTREDDKRRLEQLVKA 255
Query: 271 GVDVIVLDSSQGNSTYQIKMIKYIKETYPEIQVVGGNVVTRMQAKNLIDAGVDALRVGMG 450
G + IV+DSSQGNS YQI MIKY K+ YPE+ ++GGNVVT QA+NL+ +GVD LRVGMG
Sbjct: 256 GANAIVVDSSQGNSIYQIDMIKYAKKMYPEVDLIGGNVVTIAQAQNLVASGVDGLRVGMG 315
Query: 451 SGSICITQEVMACG 492
SGSIC TQEV A G
Sbjct: 316 SGSICTTQEVCAVG 329
Score = 115 bits (276), Expect = 4e-26
Identities = 54/75 (72%), Positives = 64/75 (85%)
Frame = +1
Query: 499 QATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGEYFF 678
+ATAVY+VASYA+ NVPVIADGGI + GHI+K+L+LGASTVMMGS LAG+ EAPG Y +
Sbjct: 398 KATAVYKVASYAKDHNVPVIADGGISNSGHIVKALSLGASTVMMGSFLAGSHEAPGTYEY 457
Query: 679 SDGVRLXKYRGMGSL 723
DG R+ KYRGMGSL
Sbjct: 458 KDGHRVKKYRGMGSL 472
>07_03_1271 +
25356087-25356232,25356419-25356543,25356650-25356696,
25356792-25356869,25356949-25357073,25357312-25357372,
25357723-25357785,25358262-25358331,25358740-25358945,
25359074-25359253
Length = 366
Score = 35.9 bits (79), Expect = 0.033
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 547 VPVIADGGIQSVGHIIKSLALGASTVMMG 633
VPV+ DGGI+ + K+LALGA VM+G
Sbjct: 281 VPVLVDGGIRRGTDVFKALALGARAVMVG 309
>07_01_0379 +
2830475-2830614,2831180-2831304,2831510-2831556,
2831838-2831962,2832116-2832182,2832266-2832328,
2832488-2832557,2832642-2832742,2832837-2832941,
2833023-2833211
Length = 343
Score = 35.1 bits (77), Expect = 0.057
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 505 TAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGE 669
+A+ +V AR +PV DGG++ + K+LALGA+ V +G + + A GE
Sbjct: 242 SALEEVVKAARG-QLPVFLDGGVRRGTDVFKALALGAAGVFIGRPVVFSLAAAGE 295
>03_06_0215 +
32416097-32416236,32416727-32416851,32417092-32417138,
32417445-32417569,32417673-32417739,32417808-32417900,
32418024-32418093,32418193-32418398,32418489-32418677
Length = 353
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 547 VPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGE 669
+PV DGG++ + K+LALGA+ V +G + A GE
Sbjct: 265 IPVYLDGGVRRGTDVFKALALGAAGVFIGRPVVFALAAEGE 305
>02_05_1232 +
35110891-35111154,35111272-35111448,35111557-35111626,
35111717-35111788,35111921-35111976
Length = 212
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 28 ITAQLGVTLQDANYILEKSKKGKLPIINNDGELVALIARTDL 153
IT T+ DA ++ K K +LPI+N D +++ ++ R D+
Sbjct: 161 ITLPSDKTVMDAAALMLKKKIHRLPIVNQDRQVIGIVTRADV 202
>08_02_1054 +
23980962-23981096,23981208-23981420,23983062-23983157,
23983420-23983565,23983679-23983898,23984502-23984561
Length = 289
Score = 31.1 bits (67), Expect = 0.93
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Frame = +1
Query: 319 QIKMIKYIKETYPEIQVVGGNVVTRM----QAKNLIDAGVDALRV-GMGSGSICITQEVM 483
Q+ ++ +E E + G V+ ++ +A +AGVD + V G +G I QE +
Sbjct: 92 QVYWGEFPRERVDEAHLAGVKVLHQVGSFEEAAKAKEAGVDGIIVQGCEAGGHVIGQEGL 151
Query: 484 ACGCPQATAVYQVASYARHFNVPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEA 660
P+ V ++ VIA GGI +LALGA V +G+ T E+
Sbjct: 152 LPLLPR------VVDLVSDTDISVIAAGGIVDGRGYAAALALGAQGVCLGTRFLTTEES 204
>04_04_1206 +
31727931-31728048,31728492-31728538,31728782-31728906,
31729067-31729133,31729221-31729283,31729429-31729498,
31729751-31729770,31729840-31729956,31730046-31730227,
31730586-31730640,31731604-31731697,31731791-31731900,
31733167-31733193,31733510-31733701
Length = 428
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 547 VPVIADGGIQSVGHIIKSLALGASTVMMGSLLAGTSEAPGEYFFSDGVRLXK 702
VPV D G + + K+LALGAS V +G + + GE + +R+ +
Sbjct: 183 VPVFIDSGFRRGTDVFKALALGASGVFIGRPVLFSLAIDGEAGVRNALRMLR 234
>02_02_0188 + 7617838-7620231,7621856-7622071,7622167-7622328,
7622466-7622516,7622936-7623070,7623161-7623184,
7623341-7623452,7623776-7623901,7624004-7624053,
7624339-7624497,7624582-7624677,7624751-7624866,
7624907-7624984,7624985-7625108,7625193-7625306,
7625423-7625503,7625616-7625756,7625834-7625848
Length = 1397
Score = 31.1 bits (67), Expect = 0.93
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Frame = +1
Query: 103 IINNDGELVALIARTDLKKARSYPNASKDSNKQLLVGAAIGTRDTDRERLKLL--VNNGV 276
I+ N G V ++AR + +KARS D L++G D + K + V N V
Sbjct: 913 ILRNKGIPVRVLARNE-EKARSMLGPDVD----LIIGDVTKENSLDPKYFKGIKKVVNAV 967
Query: 277 DVIVLDSSQGNSTYQIKMIKYIKETYPEIQVVGGNVVTRMQAKNLIDAGVDALRVGMGSG 456
VIV +G++ + K + IK PEI+ +V + +NLI+A ++ VG+ G
Sbjct: 968 SVIV-GPKEGDTPDRQKYKQGIKFFEPEIKGPSPEMVEYLGMQNLINAVKNS--VGLTEG 1024
Query: 457 SI 462
+
Sbjct: 1025 KL 1026
>03_01_0240 - 1862699-1864186,1864245-1864442
Length = 561
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +1
Query: 367 VVGGNVVTRMQAKNLIDAGVDAL-RVGMGSGSICITQEVMACGCPQATAVYQVASYARHF 543
V GG + + + AG AL R+G+G + T+ + G A A Y HF
Sbjct: 34 VSGGREYSWRETRERCLAGASALARLGVGRRDVLSTRHGLIAGQVAVIAANIPAMYELHF 93
Query: 544 NVPVIADGGI 573
+VP+ GG+
Sbjct: 94 SVPMA--GGV 101
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 412 IDAGVDALRVGMGSGSICITQEVMACGCPQATAVYQVASYARHFNV 549
+D D + V M + + IT ++ C P A++V + +SY RH V
Sbjct: 772 LDVTADIISVLMENDN-SITLDICTCVLPLASSVLEKSSYDRHLKV 816
>06_01_1066 - 8656108-8657622
Length = 504
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 484 ACGCPQATAVYQVASYARHFNV-PVIADGGIQSVGHIIKSLALGAST-VMMGSL 639
AC PQ + A++A HF + P I DG + V +++ LG T V G+L
Sbjct: 93 ACFRPQPSNRLPFATFAEHFRLSPHIDDGSFRFVTRMMERSGLGERTYVPRGNL 146
>09_04_0275 +
16302086-16303721,16304182-16304734,16305491-16305519,
16305639-16305897,16305969-16306110
Length = 872
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 412 IDAGVDALRVGMGSGSICITQEVMACGCPQAT 507
ID GVD L + +G G+ ++++ +A G AT
Sbjct: 276 IDDGVDVLSLSLGGGAFPLSRDPIAVGALAAT 307
>08_02_1027 + 23749400-23750698
Length = 432
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 79 KSKKGKLPIINNDGE-LVALIARTDLKKARSYPNASKDSNKQLLVGAAIGTRDTDRERLK 255
K KK + + +N G+ + L+ R L++ A++DS K+LLV T+ ++ ++
Sbjct: 57 KKKKNENKVTSNGGDDKLDLVHR--LEQLEGEQEAARDSEKKLLVSLGAQTKQLEQTKVS 114
Query: 256 L 258
L
Sbjct: 115 L 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,927,741
Number of Sequences: 37544
Number of extensions: 423871
Number of successful extensions: 1148
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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