Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_M06
(740 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010305-1|AAQ23623.1| 1124|Drosophila melanogaster GM01353p pro... 30 3.8
AE014297-1050|AAF54459.1| 1182|Drosophila melanogaster CG9461-PA... 30 3.8
Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein. 29 8.8
AJ011925-1|CAA09870.1| 2285|Drosophila melanogaster Kakapo protein. 29 8.8
AJ011924-1|CAA09869.1| 2396|Drosophila melanogaster Kakapo protein. 29 8.8
AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/K... 29 8.8
AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-P... 29 8.8
AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-P... 29 8.8
AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-P... 29 8.8
AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-P... 29 8.8
AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-P... 29 8.8
AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-P... 29 8.8
>BT010305-1|AAQ23623.1| 1124|Drosophila melanogaster GM01353p
protein.
Length = 1124
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 567 QLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
+LP +L I L D+ + L CK F N I ND +W+ +
Sbjct: 312 ELPDEVLLAIFSYLMEQDLCRLALVCKRF-NTIANDTELWKRL 353
>AE014297-1050|AAF54459.1| 1182|Drosophila melanogaster CG9461-PA
protein.
Length = 1182
Score = 29.9 bits (64), Expect = 3.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 567 QLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
+LP +L I L D+ + L CK F N I ND +W+ +
Sbjct: 370 ELPDEVLLAIFSYLMEQDLCRLALVCKRF-NTIANDTELWKRL 411
>Y09430-1|CAA70581.1| 4151|Drosophila melanogaster Kakapo protein.
Length = 4151
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 617 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 662
>AJ011925-1|CAA09870.1| 2285|Drosophila melanogaster Kakapo protein.
Length = 2285
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 1852 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 1897
>AJ011924-1|CAA09869.1| 2396|Drosophila melanogaster Kakapo protein.
Length = 2396
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 1963 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 2008
>AF200425-1|AAF24343.1| 5201|Drosophila melanogaster Short stop/Kakapo
long isoform protein.
Length = 5201
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 1663 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 1708
>AE013599-1792|AAF58320.2| 8805|Drosophila melanogaster CG18076-PH,
isoform H protein.
Length = 8805
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 5267 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 5312
>AE013599-1791|AAM68562.1| 5160|Drosophila melanogaster CG18076-PC,
isoform C protein.
Length = 5160
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 1622 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 1667
>AE013599-1790|AAF58319.3| 5501|Drosophila melanogaster CG18076-PA,
isoform A protein.
Length = 5501
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 1963 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 2008
>AE013599-1789|AAM68561.1| 5201|Drosophila melanogaster CG18076-PE,
isoform E protein.
Length = 5201
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 1663 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 1708
>AE013599-1788|AAG22268.2| 5390|Drosophila melanogaster CG18076-PB,
isoform B protein.
Length = 5390
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 1852 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 1897
>AE013599-1787|AAF58317.1| 5385|Drosophila melanogaster CG18076-PG,
isoform G protein.
Length = 5385
Score = 28.7 bits (61), Expect = 8.8
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 546 PMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWRAI 695
PM IN L+LPI L N + L + N+ CKT +V GV A+
Sbjct: 1852 PMEINQLELPIADLKNNYQQL----LDNLGEHCKTLDKTLVQSQGVQDAL 1897
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,825,892
Number of Sequences: 53049
Number of extensions: 522262
Number of successful extensions: 1170
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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