Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_M06
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13875-10|AAA21159.1|  332|Caenorhabditis elegans F-box synaptic...    37   0.013
Z70286-3|CAA94296.1|  298|Caenorhabditis elegans Hypothetical pr...    31   0.86 
AC006777-8|AAK72305.2|  367|Caenorhabditis elegans Seven tm rece...    31   0.86 
U28944-9|AAL02438.1|  122|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z50742-1|CAA90614.2|  605|Caenorhabditis elegans Hypothetical pr...    29   3.5  
AF067220-10|AAC16976.2|   74|Caenorhabditis elegans Hypothetical...    28   6.0  

>U13875-10|AAA21159.1|  332|Caenorhabditis elegans F-box synaptic
           protein protein 1 protein.
          Length = 332

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = +3

Query: 555 INILQLPIHILANILRNLKLGDIRNVILTCKTFKN-LIVNDNGVWRAICEDRL 710
           ++  +LP+ +L  I + L L D+R+ +LTC ++ N L + D+ +W+ +   +L
Sbjct: 80  VSASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDSDIWQYLLGKKL 132


>Z70286-3|CAA94296.1|  298|Caenorhabditis elegans Hypothetical
           protein K08C7.7 protein.
          Length = 298

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +3

Query: 561 ILQLPIHILANILRNLKLGDIRNVILTCKTFKNLI 665
           IL+LP  ++ ++L+N    ++ ++ +TCKT   LI
Sbjct: 8   ILELPPELILHVLKNYCYEELNDITVTCKTLHALI 42


>AC006777-8|AAK72305.2|  367|Caenorhabditis elegans Seven tm
           receptor protein 221 protein.
          Length = 367

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = -1

Query: 449 IFRY**IYVGMFEYF---LTTLTKPFKHCHFSTNYCIVSMNRYIV--FILYIL 306
           +++Y  +Y  +FE F   +T LT PF H  ++T   I+S     +  F+L IL
Sbjct: 43  VYKYFMLYFSIFEIFYGIVTALTSPFHHTQYATYSTIISSKDRALSHFVLNIL 95


>U28944-9|AAL02438.1|  122|Caenorhabditis elegans Hypothetical
           protein C18A3.9 protein.
          Length = 122

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
 Frame = -1

Query: 386 PFKHCHFSTNYC-----IVSMNRYIVFILYI---L*NICQGNKYIFY 270
           P + C  S+++C     I+ +N + VF+ YI   L N+C  N  IFY
Sbjct: 63  PPQKCQPSSHWCSIRCAIIIVNNFFVFMYYIFLVLVNVCNNNLLIFY 109


>Z50742-1|CAA90614.2|  605|Caenorhabditis elegans Hypothetical
           protein K09A11.1 protein.
          Length = 605

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 534 HLGIPMSINILQLPIHILANILRNLKLGDIRNVILTCKTFKNLIVNDNGVWR 689
           HL I  S+N     +H+ A   ++ K+G I  V+L CK     + N +  W+
Sbjct: 250 HLKIS-SVNCFNQQLHLAACEAKS-KIGQINRVLLNCKLLVKNLKNSSVTWQ 299


>AF067220-10|AAC16976.2|   74|Caenorhabditis elegans Hypothetical
           protein C33E10.1 protein.
          Length = 74

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = +3

Query: 555 INILQLPIHILANILRNLKLGDIRNVILTCKTFKNL 662
           +NILQLP   L   L++ +L DI N     K  KNL
Sbjct: 1   MNILQLPAKALRCTLQHCQLLDILNFSFVSKKTKNL 36


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,161,494
Number of Sequences: 27780
Number of extensions: 304005
Number of successful extensions: 685
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)