Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_M05
         (559 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    26   0.25 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   2.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   3.1  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   4.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   7.2  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 539 WLGPRTKPTTPRSPEGSIFHRIK 471
           W  P  KP   RS  GSI+H +K
Sbjct: 155 WEFPENKPKKIRSKLGSIWHSVK 177


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 33  RGSSAGFKLPPFXNIIHKVLVILSAVCV 116
           RG+   F+LP   N + KVL++   V V
Sbjct: 13  RGTPPKFELPTTHNCLKKVLLLSQIVGV 40


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 256 PPRGVVLRSSVHRLQGR 306
           PP+G ++ SS+H+ Q R
Sbjct: 132 PPQGQLVLSSMHKYQPR 148


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 533 GPRTKPTTPRSPEGSI 486
           GP   P+TP  P GS+
Sbjct: 204 GPEPVPSTPYPPPGSL 219


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 119  IITIKMVAGGKQMNVRVTTMD 181
            IIT + V GG   ++RV T D
Sbjct: 988  IITAEEVPGGPPTSIRVETND 1008


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = +3

Query: 6   SNDXAASDRRGSSAGFKLPPFXNIIHKVLVILSAVC 113
           S+D A     GS +G   PP     H   V+   VC
Sbjct: 518 SSDDAKGGGGGSGSGNNQPPGGPSSHVSAVLTCKVC 553


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -1

Query: 430 LLYELIGDILRIEXGSEFELQW 365
           L + L GD+L +    E +L W
Sbjct: 145 LSFNLFGDLLTLFIKEELDLVW 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,272
Number of Sequences: 336
Number of extensions: 1952
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)