Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_M05
         (559 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865...    31   0.82 
08_02_0266 + 15051868-15052286,15052376-15052475,15053540-150535...    27   7.7  
02_03_0364 + 18191769-18192326                                         27   7.7  

>04_04_1035 + 30283456-30283536,30284823-30285359,30285508-30286512,
            30286718-30287042,30287563-30287818,30287901-30288117,
            30288743-30289095,30289330-30289833,30291267-30292467,
            30292614-30292970,30293258-30293495,30294083-30295125,
            30295234-30296649,30296731-30296855,30297036-30297314,
            30297352-30297382,30298957-30299022,30299447-30299689,
            30299848-30299898,30299980-30300071,30300182-30300249,
            30300515-30300600,30300720-30300824,30300994-30301127,
            30302403-30302436,30302620-30302892,30303019-30303288,
            30303384-30303974,30304065-30304214
          Length = 3376

 Score = 30.7 bits (66), Expect = 0.82
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -1

Query: 217  GGRLLDR-EXEFRVHRRHADVHLFSSGNHFDSYDHTHTADKITSTLCII 74
            GG  LDR E E ++H R    H  +   H   + H H  D   S++ I+
Sbjct: 2801 GGYDLDRIESEVQLHERKETGHCHAGEEHGHQHHHGHVHDSAVSSVSIV 2849


>08_02_0266 +
           15051868-15052286,15052376-15052475,15053540-15053581,
           15053734-15053930,15055412-15055508,15055604-15055699,
           15056395-15056633,15056728-15056811,15056898-15057185,
           15057658-15057718,15061093-15061362,15061663-15061722
          Length = 650

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
 Frame = -1

Query: 148 SSGNHFDSYDHTHTADKITSTLCIIFXKGGSL-------KPALEPRLSDAAXSF 8
           SS ++ D+Y   + +D  T  +C I  +GG L       K +  P+L D   SF
Sbjct: 220 SSDDNGDNYTDGNASDDGTEAVCAICDQGGILLGCKGECKRSFHPKLEDGTKSF 273


>02_03_0364 + 18191769-18192326
          Length = 185

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 557 DXVLRVWLGPRTKPTTPRSPEGS 489
           D  LR+ L P T PTTPR  +G+
Sbjct: 11  DGELRLLLLPATAPTTPRDDDGA 33


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,208,450
Number of Sequences: 37544
Number of extensions: 222273
Number of successful extensions: 529
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1269546012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)