Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_M01
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   4.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   5.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   5.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.6  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 191 CTTKSKHGDMLTMHY-TGTLHD-GHKFDSSYDRD 286
           CT K K G    +HY      D  ++ ++ YD+D
Sbjct: 78  CTEKQKEGSRKIIHYLIDNKRDWWNELEAKYDKD 111


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 193 HHEVQARRYAHHALH 237
           HHE  A  + HH LH
Sbjct: 118 HHEEVADGHQHHFLH 132


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 193 HHEVQARRYAHHALH 237
           HHE  A  + HH LH
Sbjct: 118 HHEEVADGHQHHFLH 132


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 193 HHEVQARRYAHHALH 237
           HHE  A  + HH LH
Sbjct: 118 HHEEVADGHQHHFLH 132


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 140 GPEVTELKTEVVSVPEGCT 196
           GP++TEL+ E +   +  T
Sbjct: 282 GPQITELEPETIESQDAIT 300


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 140 GPEVTELKTEVVSVPEGCT 196
           GP++TEL+ E +   +  T
Sbjct: 515 GPQITELEPETIESQDAIT 533


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 140 GPEVTELKTEVVSVPEGCT 196
           GP++TEL+ E +   +  T
Sbjct: 515 GPQITELEPETIESQDAIT 533


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,238
Number of Sequences: 336
Number of extensions: 3278
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)