Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_M01
         (720 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    68   3e-13
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    25   2.4  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   5.4  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   5.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.4  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   9.5  

>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 68.1 bits (159), Expect = 3e-13
 Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = +2

Query: 167 EVVSVPEGC-TTKSKHGDMLTMHYTGTLHDGHKFDSSYDRDQPFTFQIGVGQVIKGWDQG 343
           ++V +  G  TT  K G    +HYTGTL DG  FDSS  R +PF F +G G+VI+GWD+G
Sbjct: 4   QIVPIANGDQTTFPKPGQTAVVHYTGTLDDGTVFDSSRTRGKPFKFSVGKGEVIRGWDEG 63

Query: 344 LA 349
           +A
Sbjct: 64  VA 65



 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
 Frame = +3

Query: 183 QKDAPRSPSTAICSPCTTLARYTT-DTSSTRVMIAINLLRSKLALGK*SRDGTRALLDMC 359
           Q   P+   TA+     TL   T  D+S TR        +  +  G+  R     +  M 
Sbjct: 13  QTTFPKPGQTAVVHYTGTLDDGTVFDSSRTRG----KPFKFSVGKGEVIRGWDEGVAQMS 68

Query: 360 VGEKRKLTIPASLGYGERGAGNVIPPHATLHFEVELINI 476
           VG++ KL       YG RG   VIPP+A L F+VEL+ +
Sbjct: 69  VGQRAKLVCSPDYAYGSRGHPGVIPPNARLTFDVELLRV 107


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -3

Query: 430 ITLPAPRSP*PKDAGIVSLRFSPTHMSSKALVPSLDHLPNANLERKRLIAIITRV 266
           I + APR P PK+A ++   F  +  S  A +   DH   A+ E   ++++  RV
Sbjct: 258 INVVAPR-PRPKNAAVMLWIFGGSFYSGTATLDVYDHRALASEENVIVVSLQYRV 311


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -3

Query: 430 ITLPAPRSP*PKDAGIVSLRFSPTHMSSKALVPSLDHLPNANLERKRLIAIITRV 266
           I + APR P PK+A ++   F     S  A +   DH   A+ E   ++++  RV
Sbjct: 258 INVVAPR-PRPKNAAVMLWIFGGGFYSGTATLDVYDHRALASEENVIVVSLQYRV 311


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = -3

Query: 430 ITLPAPRSP*PKDAGIVSLRFSPTHMSSKALVPSLDHLPNANLERKRLIAIITRV 266
           I + APR P PK+A ++   F     S  A +   DH   A+ E   ++++  RV
Sbjct: 144 INVVAPR-PRPKNAAVMLWIFGGGFYSGTATLDVYDHRALASEENVIVVSLQYRV 197


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 471 NIGDSPPATNVFKEIDADKDNMLSR 545
           N+G  PP ++    +D D+D ++ R
Sbjct: 339 NMGGGPPPSSATPSVDDDEDVVIGR 363


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +2

Query: 398  GLRRARSRQRDSSPRYIAFRSGVDQHR*LSTGHKRVQGN 514
            G RR+RSR R  S      RSG    +      K V G+
Sbjct: 1159 GSRRSRSRSRSRSGSRSRSRSGSGSRQASPISRKSVSGS 1197


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 746,358
Number of Sequences: 2352
Number of extensions: 15398
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)