Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_L24
         (839 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0610 - 16167557-16167679,16168236-16168418,16169291-161694...    28   8.1  
02_04_0067 - 19425019-19425288,19425393-19425647,19425766-194259...    28   8.1  

>05_03_0610 -
           16167557-16167679,16168236-16168418,16169291-16169414,
           16169514-16169626,16169668-16169742
          Length = 205

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 142 YRAQNDSPEPKGTKPTREASSIQEVLTLMIVHICKKILFFD 264
           Y A+    + KG +PT    ++ + L L I+ IC    FFD
Sbjct: 2   YTARRKIQKDKGLEPTEFEDTVAQHLKLWILTICGGQAFFD 42


>02_04_0067 - 19425019-19425288,19425393-19425647,19425766-19425937,
            19426069-19426302,19426523-19426656,19427663-19427746,
            19428355-19428645,19428788-19429120,19429317-19429390,
            19429464-19429644,19429993-19430096,19430232-19430392,
            19430727-19431040,19431583-19431864,19432431-19432732,
            19433176-19433266,19433368-19433421,19438917-19438993,
            19439081-19439240,19439410-19439494,19439574-19440130
          Length = 1404

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 640  ISGHCFIL-IYSSLVLIEEARAINGWERIKDYIRDERYSRSIDDKAISTNPLKNI 801
            ISG+C    ++S  + +EE+ A + W R+   + D +  R   D+ I T  L +I
Sbjct: 887  ISGYCEQTDVHSPQITVEESVAYSAWLRLPTEV-DSKTRREFVDEVIQTIELDDI 940


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,740,463
Number of Sequences: 37544
Number of extensions: 375126
Number of successful extensions: 806
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)