Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_L24
         (839 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130446-1|AAI30447.1|  262|Homo sapiens chromosome 20 open read...    99   2e-20
AL117382-3|CAI23111.1|  262|Homo sapiens chromosome 20 open read...    99   2e-20
BC139911-1|AAI39912.1|  292|Homo sapiens similar to CG10671-like...    69   2e-11
BC014339-1|AAH14339.1|  201|Homo sapiens transmembrane 4 L six f...    36   0.18 

>BC130446-1|AAI30447.1|  262|Homo sapiens chromosome 20 open reading
           frame 142 protein.
          Length = 262

 Score = 99.1 bits (236), Expect = 2e-20
 Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 8/132 (6%)
 Frame = +1

Query: 337 PKSYFSRSDNFFNQYFVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATV 516
           P+SY S   N  N YFVK+ W WT  + +P++ LT+Y    GK  ++    +  LL+ T 
Sbjct: 45  PESYLSNKRNVLNVYFVKVAWAWTFCLLLPFIALTNYHLT-GKAGLVLR-RLSTLLVGTA 102

Query: 517 FWWGWTTLFNVIENNYGRCNS--------KSYDNKITCLKNGSFWNGFDISGHCFILIYS 672
            W+  T++F+ IE+  G C          K + +K  C + G FW+GFDISGH F+L + 
Sbjct: 103 IWYICTSIFSNIEHYTGSCYQSPALEGVRKEHQSKQQCHQEGGFWHGFDISGHSFLLTFC 162

Query: 673 SLVLIEEARAIN 708
           +L+++EE   ++
Sbjct: 163 ALMIVEEMSVLH 174


>AL117382-3|CAI23111.1|  262|Homo sapiens chromosome 20 open reading
           frame 142 protein.
          Length = 262

 Score = 99.1 bits (236), Expect = 2e-20
 Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 8/132 (6%)
 Frame = +1

Query: 337 PKSYFSRSDNFFNQYFVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATAHMVRLLIATV 516
           P+SY S   N  N YFVK+ W WT  + +P++ LT+Y    GK  ++    +  LL+ T 
Sbjct: 45  PESYLSNKRNVLNVYFVKVAWAWTFCLLLPFIALTNYHLT-GKAGLVLR-RLSTLLVGTA 102

Query: 517 FWWGWTTLFNVIENNYGRCNS--------KSYDNKITCLKNGSFWNGFDISGHCFILIYS 672
            W+  T++F+ IE+  G C          K + +K  C + G FW+GFDISGH F+L + 
Sbjct: 103 IWYICTSIFSNIEHYTGSCYQSPALEGVRKEHQSKQQCHQEGGFWHGFDISGHSFLLTFC 162

Query: 673 SLVLIEEARAIN 708
           +L+++EE   ++
Sbjct: 163 ALMIVEEMSVLH 174


>BC139911-1|AAI39912.1|  292|Homo sapiens similar to CG10671-like
           protein.
          Length = 292

 Score = 68.9 bits (161), Expect = 2e-11
 Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
 Frame = +1

Query: 337 PKSYFSRSDNFFNQYFVKIGWFWTLVITVPYVLLTSYTTCCGKRRMIATA-HMVRLLIAT 513
           P++ F+   NFFN  FV   W WT      +VLL  +      RR+  TA H+ RL++  
Sbjct: 76  PRTIFASHGNFFNIKFVNSAWGWTCTFLGGFVLLVVFLAT---RRVAVTARHLSRLVVGA 132

Query: 514 VFWWGWTTLFNVIENNYGRCNSK--------SYDNKITCLKNGSFWNGFDISGHCFILIY 669
             W G    F +IE+  G C              ++ +CL  G  W G+ +S H F+L +
Sbjct: 133 AVWRGAGRAFLLIEDLTGSCFEPLPQGLLLHELPDRRSCLAAGHQWRGYTVSSHTFLLTF 192

Query: 670 SSLVLIEEA 696
             L++ EEA
Sbjct: 193 CCLLMAEEA 201


>BC014339-1|AAH14339.1|  201|Homo sapiens transmembrane 4 L six
           family member 18 protein.
          Length = 201

 Score = 35.9 bits (79), Expect = 0.18
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +1

Query: 532 TTLFNVIENN--YGRCNSKSYDNKITCLKNGSFWN-GFDISGHCFILIYSSLVLIEEARA 702
           TT+  V+ENN  Y  C S++   K   L +  F + G   SG+C ++    LV     R 
Sbjct: 64  TTVLLVLENNNNYKCCQSENCSKKYVTLLSIIFSSLGIAFSGYCLVISALGLVQGPYCRT 123

Query: 703 INGWE 717
           ++GWE
Sbjct: 124 LDGWE 128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,044,847
Number of Sequences: 237096
Number of extensions: 2212253
Number of successful extensions: 7116
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7110
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)