Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_L23
         (637 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical ...    31   0.52 
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z83129-6|CAB63324.1|  101|Caenorhabditis elegans Hypothetical pr...    28   6.4  
M22751-1|AAA28106.1|  211|Caenorhabditis elegans protein ( C.ele...    28   6.4  
L15201-2|AAA27945.2|  200|Caenorhabditis elegans Male abnormal p...    28   6.4  
AF277990-1|AAG00458.1|  200|Caenorhabditis elegans MAB-5 protein.      28   6.4  

>AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical
           protein Y97E10AL.2 protein.
          Length = 345

 Score = 31.5 bits (68), Expect = 0.52
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
 Frame = +3

Query: 15  IREDQRVSYI---IWIGHNENDTSCPVRVKTHIFAASEP*EDDDTVRSTPSHHRSRPVHV 185
           +R D+R+  +   I I H E+D   PV++   ++ A++  E D  +R   S +      +
Sbjct: 259 MRSDKRIRLVSCPIIILHAEDDKILPVKLGRALYEAAKDAERDIKIREFSSDYGLGHKFI 318

Query: 186 *RTPDDPQPV*TRLGQTSTPTT 251
            R P+ P+ +   +G  + P+T
Sbjct: 319 CRYPELPEIIEEFVGSVTPPST 340


>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -2

Query: 309  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYAKRGQAE 169
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -2

Query: 309  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYAKRGQAE 169
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -2

Query: 309  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYAKRGQAE 169
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -2

Query: 309  QKTFCFCIVNCLRQACSGGLLWEYWFVLNASRLVEDHLAYAKRGQAE 169
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244


>Z83129-6|CAB63324.1|  101|Caenorhabditis elegans Hypothetical
           protein W06G6.10 protein.
          Length = 101

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -2

Query: 345 CPTWMHSGVFFFQKTFCFCIVNCLRQACSG 256
           C + MH  + FF +  C C   C++  C G
Sbjct: 72  CCSCMHGVLRFFAELCCNCCAGCVQGICQG 101


>M22751-1|AAA28106.1|  211|Caenorhabditis elegans protein (
           C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
          Length = 211

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 181 WTGRDRWWLGVERTVSSSSHGS 116
           WTG D +W G   T SS S  S
Sbjct: 18  WTGDDSYWAGAGTTASSQSASS 39


>L15201-2|AAA27945.2|  200|Caenorhabditis elegans Male abnormal
           protein 5 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 181 WTGRDRWWLGVERTVSSSSHGS 116
           WTG D +W G   T SS S  S
Sbjct: 7   WTGDDSYWAGAGTTASSQSASS 28


>AF277990-1|AAG00458.1|  200|Caenorhabditis elegans MAB-5 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 181 WTGRDRWWLGVERTVSSSSHGS 116
           WTG D +W G   T SS S  S
Sbjct: 7   WTGDDSYWAGAGTTASSQSASS 28


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,644,814
Number of Sequences: 27780
Number of extensions: 265797
Number of successful extensions: 595
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)