Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_L22
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal prote... 185 2e-47
Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical pr... 33 0.11
U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical pr... 29 1.7
AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical... 29 1.7
AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical ... 29 2.3
Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 28 4.0
Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical pr... 28 4.0
AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical ... 28 4.0
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 27 6.9
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 27 6.9
Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 27 9.1
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 27 9.1
>L15188-7|AAA27951.1| 161|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 21 protein.
Length = 161
Score = 185 bits (450), Expect = 2e-47
Identities = 89/148 (60%), Positives = 109/148 (73%), Gaps = 2/148 (1%)
Frame = +1
Query: 88 LFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGKTGRVYNVTAHALG 267
+FAR FR HG LSTY YK GD+VDI+ NGA QKGMP K YHG+TGR++NVT A+G
Sbjct: 14 MFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVG 73
Query: 268 VIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTV-NLKRQP 444
+IVNKRVRG I+PKRINIR+EH+K SKCR DFL RVK N+ K AK+AG+ V LKR P
Sbjct: 74 IIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLP 133
Query: 445 APPKAAH-IVSGTEKPVLLAPIPYEFVA 525
P+ AH + + +P LLAP+ +E VA
Sbjct: 134 VAPRGAHTVTTQNNEPELLAPLRFEIVA 161
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 48 MTNSKGYRRGTRXL 89
MTNSKG RRGTR +
Sbjct: 1 MTNSKGLRRGTRYM 14
>Z83244-6|CAD18877.1| 502|Caenorhabditis elegans Hypothetical
protein W06F12.2c protein.
Length = 502
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 233 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 96
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-5|CAB54315.1| 568|Caenorhabditis elegans Hypothetical
protein W06F12.2b protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 233 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 96
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 226 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 271
>Z83244-4|CAB54314.1| 562|Caenorhabditis elegans Hypothetical
protein W06F12.2a protein.
Length = 562
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = -2
Query: 233 PVFPWYTLCGIPF*TAPLPLMSTMSPTLYTFMYVESGIVPCVRNLR 96
PVFP Y+ G+P PLP +P M V+ + P V+NLR
Sbjct: 220 PVFPSYSRAGVPQTPIPLPPTQINTPYPIDPMEVQFTVQPKVKNLR 265
>U00047-4|AAA50690.1| 825|Caenorhabditis elegans Hypothetical
protein ZK418.6 protein.
Length = 825
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 427 NLKRQPAPPKAAHIVSGTE 483
NL+R+PAPPK H+ S E
Sbjct: 462 NLRRRPAPPKQNHVASPAE 480
>AC084197-45|AAK68589.4| 751|Caenorhabditis elegans Hypothetical
protein Y73B6BL.1 protein.
Length = 751
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 150 QSWRHCRHQRQWCSSKGYATQSIPWKDRSRVQRYCSCSRCDCQQAC 287
Q RHC Q C S Y W+ RSRV +C+ + Q C
Sbjct: 366 QPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCTGYEGTQIC 411
>AL132853-5|CAB60443.1| 279|Caenorhabditis elegans Hypothetical
protein Y80D3A.9 protein.
Length = 279
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 492 DGFLSSTDDVGSFRGSWLSLQVDGLAGSL 406
DG LS D+ RG+WL + G G L
Sbjct: 39 DGMLSGVDEKDVARGTWLGMDAHGKVGML 67
>Z46267-9|CAA86427.2| 889|Caenorhabditis elegans Hypothetical
protein F49E2.5d protein.
Length = 889
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 325 VEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVN-LKRQPAPPKAAHIVSGTEKPVLLA 501
VE+V + K+N++ K++++ T ++ PAPP+ +V EKPV A
Sbjct: 361 VENVVEKSTTPPATENKKKNKKDKKKSESEKVTEQPVESAPAPPQVEQVVEKVEKPV--A 418
Query: 502 PI 507
P+
Sbjct: 419 PV 420
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 387 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSNVVHAT 232
LILFD+LK VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 28.3 bits (60), Expect = 4.0
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -1
Query: 387 LILFDSLKEVLSALGVLDMLNTDIDALRYNPSANTLVDNHTESMSSNVVHAT 232
LILFD+LK VL ++GVL + I+ L A L +TE + + ++
Sbjct: 200 LILFDALKNVLQSVGVLTTKSVLINWLPSVQIAEILEHFNTEILEDLTIKSS 251
>Z78016-1|CAB01439.1| 276|Caenorhabditis elegans Hypothetical
protein R186.1 protein.
Length = 276
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 492 DGFLSSTDDVGSFRGSWLSLQVDGLAGSL 406
DG LS D + RG+WL L +G G +
Sbjct: 39 DGILSGVDKQENARGTWLGLNENGRIGMM 67
>AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical
protein Y54F10BM.6 protein.
Length = 280
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 225 KDRSRVQR-YCSCSRCDCQQACSRKDYTEAHQYPC*ACQ 338
+D SR R Y +C C+ AC D+T+ + C C+
Sbjct: 156 QDVSRTPRVYSTCGHTSCE-ACVESDFTQKKRVVCLTCE 193
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +3
Query: 243 QRYCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 422
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 423 RQPEETAS 446
Q S
Sbjct: 92 CQSAPAVS 99
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 27.5 bits (58), Expect = 6.9
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +3
Query: 243 QRYCSCSRCDCQQACSRKDYTEAHQYPC*ACQALQVQTRLP*ESQRE*EATEGSQGCRQD 422
Q CSC + Q+CS + Q P +C Q Q + Q A Q CRQ
Sbjct: 34 QSQCSCQQVQQTQSCSCQSAPVQQQAP--SCSCAQPQQTQTVQVQSTQCAPACQQSCRQQ 91
Query: 423 RQPEETAS 446
Q S
Sbjct: 92 CQSAPAVS 99
>Z81526-4|CAB04267.2| 430|Caenorhabditis elegans Hypothetical
protein F33H2.7 protein.
Length = 430
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +3
Query: 228 DRSRVQRYCSCSRC----DCQQACSRKDYTEAHQYPC 326
D S+ +C C C C RKD+ HQ+ C
Sbjct: 31 DSSQETEILTCDDCLAVSYCTLKCQRKDWKSCHQFEC 67
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/72 (22%), Positives = 29/72 (40%)
Frame = +1
Query: 301 IPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 480
+P R+ V+ + ++ +R KE+E + + + + R P PP I
Sbjct: 207 LPPTPPARITSVRSDESIEEEERRRKESEETASFEELEAEIMRISRSPVPPPVLSIPPPP 266
Query: 481 EKPVLLAPIPYE 516
+ L IP E
Sbjct: 267 PPNIPLPTIPQE 278
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/72 (22%), Positives = 29/72 (40%)
Frame = +1
Query: 301 IPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAKAAGKTVNLKRQPAPPKAAHIVSGT 480
+P R+ V+ + ++ +R KE+E + + + + R P PP I
Sbjct: 207 LPPTPPARITSVRSDESIEEEERRRKESEETASFEELEAEIMRISRSPVPPPVLSIPPPP 266
Query: 481 EKPVLLAPIPYE 516
+ L IP E
Sbjct: 267 PPNIPLPTIPQE 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,589,113
Number of Sequences: 27780
Number of extensions: 260402
Number of successful extensions: 980
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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