Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_L20
         (825 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81029-1|CAB02697.1|  465|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z77661-3|CAB01187.2|  264|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z78539-3|CAB01730.1|  177|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z83238-9|CAB05790.1|  108|Caenorhabditis elegans Hypothetical pr...    28   9.3  
Z79598-5|CAB01863.1|  367|Caenorhabditis elegans Hypothetical pr...    28   9.3  
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical...    28   9.3  
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical...    28   9.3  

>Z81029-1|CAB02697.1|  465|Caenorhabditis elegans Hypothetical
           protein C01A2.1 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 422 REQVHRTTPQPATQCQELRHH 484
           RE  H+ TP+P T C+ + HH
Sbjct: 429 REGRHQCTPKPCTYCKRINHH 449


>Z77661-3|CAB01187.2|  264|Caenorhabditis elegans Hypothetical
           protein F40G12.4 protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 171 RMDNFTYSYKDAMRCKEHICRHGYSYETFYRVDA 272
           R+D F Y Y++ +     I  HG   +T+YR++A
Sbjct: 88  RLDVFNYYYEELVDALSFIPAHGGCSDTYYRLNA 121


>Z78539-3|CAB01730.1|  177|Caenorhabditis elegans Hypothetical
           protein C31E10.4 protein.
          Length = 177

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -3

Query: 649 TPFQAAKLKYFTDNGSTSLKLIKGSACPSLPNSTR 545
           TP   ++ ++ TD+    ++L+ G AC S+P++TR
Sbjct: 7   TPTSISR-RHLTDSARRCIQLVVGVACCSVPSATR 40


>Z83238-9|CAB05790.1|  108|Caenorhabditis elegans Hypothetical
           protein T08G3.11 protein.
          Length = 108

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/52 (23%), Positives = 26/52 (50%)
 Frame = +3

Query: 174 MDNFTYSYKDAMRCKEHICRHGYSYETFYRVDANEMRSINVDPHSVFEMHIA 329
           M  + YS+K      +++C+   S   F + D+  +R +  D H+ +++  A
Sbjct: 1   MKKYLYSFKAKKNQIDYLCKTAISEGIFNKEDSENIRKVYWDLHAWYDIERA 52


>Z79598-5|CAB01863.1|  367|Caenorhabditis elegans Hypothetical
           protein C44H4.6 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 15/54 (27%), Positives = 26/54 (48%)
 Frame = -3

Query: 721 GWELGMSSIDVSPGIGQSYKNLASTPFQAAKLKYFTDNGSTSLKLIKGSACPSL 560
           G +L +S++++   + +    L   P++A  L YF D      KL  G+  P L
Sbjct: 283 GRKLSLSTLELLNSLMKMDPKLRIKPYEALTLPYFDDLRDPHYKLPSGAPIPPL 336


>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6c protein.
          Length = 1245

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = +1

Query: 172  EWIISLIVTKMRCAVKS-ISVDTVTVTKLSTGWTRTK*GASTLTLIQSSRCTSRSKPPAT 348
            E +I LI +K   +  S   VD + V  ++  ++       ++  ++  R  + S P ++
Sbjct: 1027 ESLIDLIASKSIGSCPSETDVDRIQVADVAKSYSVVD---ESIEKMKQLRAKALSSPDSS 1083

Query: 349  DT*CSLKSLILASVIQFTKLW 411
             T   +K L + S IQF +LW
Sbjct: 1084 STKLEMKMLPVMSQIQFIQLW 1104


>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
            protein Y45F10A.6c protein.
          Length = 1245

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = +1

Query: 172  EWIISLIVTKMRCAVKS-ISVDTVTVTKLSTGWTRTK*GASTLTLIQSSRCTSRSKPPAT 348
            E +I LI +K   +  S   VD + V  ++  ++       ++  ++  R  + S P ++
Sbjct: 1027 ESLIDLIASKSIGSCPSETDVDRIQVADVAKSYSVVD---ESIEKMKQLRAKALSSPDSS 1083

Query: 349  DT*CSLKSLILASVIQFTKLW 411
             T   +K L + S IQF +LW
Sbjct: 1084 STKLEMKMLPVMSQIQFIQLW 1104


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,545,136
Number of Sequences: 27780
Number of extensions: 400545
Number of successful extensions: 1088
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)