Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_L19
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.2  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   6.2  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   8.2  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   8.2  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -2

Query: 231 LEPIYIYNVNAPPTLRYKLRSQYS*NGCP-TLQTE 130
           L  +   +V APP    KLR+Q S  G P  LQ E
Sbjct: 785 LSAVIQISVQAPPQFDIKLRNQTSRRGDPAVLQCE 819


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 742 KHGGENIKSLKSFVIFKQLKHSKKTNKK 659
           +H    IKS+  FVIF   K  K  N K
Sbjct: 219 QHFRRQIKSVDLFVIFPLTKAEKVRNLK 246


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 742 KHGGENIKSLKSFVIFKQLKHSKKTNKK 659
           +H    IKS+  FVIF   K  K  N K
Sbjct: 175 QHFRRQIKSVDLFVIFPLTKAEKVRNLK 202


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 237 WLLEPIYIYNVNAPPTLRYKL 175
           WL  P  + N   P +LR+KL
Sbjct: 7   WLTPPHSLGNTVTPVSLRFKL 27


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 244 TRWAVSSSTHTSN 282
           TR + SSSTHTS+
Sbjct: 384 TRKSTSSSTHTSS 396


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -1

Query: 655 WSLFLLYNNFRIFFY 611
           W+ F  Y+NF +F +
Sbjct: 64  WNQFRSYSNFSVFLF 78


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -1

Query: 493 RCSTKCRIYYLKNQTFSLKQ*KQSYQQMICKKRKSLPKLNMYLSEFKI 350
           R   K R+ Y   Q   L++      + I  KRKS    N+ LSE +I
Sbjct: 154 RTKDKYRVVYTDLQRIELEKEFTFVSKYITIKRKSELAENLGLSERQI 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,614
Number of Sequences: 336
Number of extensions: 4597
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)