Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_L19
         (769 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0377 - 24498664-24500215,24500306-24500643                       29   4.1  
10_07_0033 + 12152655-12152906,12153203-12153432,12154126-121541...    29   5.4  
04_04_1358 + 32869222-32869306,32869947-32870008,32870301-328703...    28   7.1  

>05_05_0377 - 24498664-24500215,24500306-24500643
          Length = 629

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 209 LYMYMGSSNHLTPGGL*ARPPIQAIFFLFRYHI 307
           +Y+Y   S   TPGGL ARP + + F+  RY +
Sbjct: 158 MYLYFVKSEWRTPGGLPARPVLTS-FYRSRYFL 189


>10_07_0033 +
           12152655-12152906,12153203-12153432,12154126-12154195,
           12154945-12154968
          Length = 191

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -1

Query: 145 HPSNRTHYCFTAEIGRVVVPTRADSQYVLTPVINHSHLF 29
           HP     Y   +E     VP RAD ++++T    H H F
Sbjct: 118 HPDGPKLYTIASEARSGRVPARADREHLMTYTGEHEHSF 156


>04_04_1358 + 32869222-32869306,32869947-32870008,32870301-32870393,
            32870640-32870761,32873139-32873167,32873586-32873891,
            32873977-32874035,32874148-32874279,32874414-32874455,
            32874560-32875093,32875189-32875379,32875538-32876027,
            32876273-32876335,32876704-32876805,32876895-32877215,
            32877294-32877386,32877484-32877585,32877718-32877822,
            32877933-32878066,32878429-32878612,32879226-32879357,
            32879447-32879559,32879628-32879709,32880328-32881992
          Length = 1746

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = -1

Query: 508  VAKGPRCSTKCRIYYLKNQTFSLKQ*KQSYQQMICKKRKSLPKLNMYLSEF 356
            V +GPR +    +YY    TF  KQ     Q  I +   S P +N + +EF
Sbjct: 1521 VPRGPRST----LYYRTGHTFQRKQGYAHSQSTILRGSNSPPTMNPHAAEF 1567


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,563,755
Number of Sequences: 37544
Number of extensions: 399687
Number of successful extensions: 750
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)