Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_L10
         (702 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        25   2.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   7.0  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    23   9.3  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 238 WKLALSKLFIIPQRYVLAVMGL 303
           W +++  LFI P RY   V GL
Sbjct: 6   WSVSIGNLFIEPNRYRRIVSGL 27


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 614 PNPRTHFPPNRSANIPP 564
           PNP T  PP  + +IPP
Sbjct: 64  PNPFTAGPPKPNISIPP 80


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 23.0 bits (47), Expect = 9.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 629 AVDSKPNPRTHFPPNRS 579
           A+ ++ NP T+ PPNRS
Sbjct: 23  ALYTRQNPGTNRPPNRS 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,834
Number of Sequences: 2352
Number of extensions: 16078
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)