Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_L07
         (833 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    26   0.42 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   6.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   6.9  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 772 LYVFXAPL-RXKQPHPVRLRCRALDRSIQRERQKYSYSLVKQSDCSL 635
           LY +  P  R K+ HP +   + +++  +R   K +  +V  S CS+
Sbjct: 38  LYTYRQPYPRQKKSHPPQWTWQCINQRCERRHIKGAIPVVSLSTCSM 84


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 382 FTASAMDMVSFDFLVNLKVPFIKIG 456
           F A    + SFD L ++ V FIK G
Sbjct: 110 FLARGTLIKSFDMLSHVDVSFIKAG 134


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 382 FTASAMDMVSFDFLVNLKVPFIKIG 456
           F A    + SFD L ++ V FIK G
Sbjct: 110 FLARGTLIKSFDMLSHVDVSFIKAG 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,930
Number of Sequences: 336
Number of extensions: 4069
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)