Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_L02
(646 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 29 0.43
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 29 0.43
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 29 0.43
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 29 0.43
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 29 0.43
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 29 0.43
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 29 0.43
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 29 0.43
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 29 0.57
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 29 0.57
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 29 0.57
SPMIT.06 |||mitochondrial DNA binding endonuclease|Schizosacchar... 27 1.8
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 27 3.1
SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|... 27 3.1
SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr ... 27 3.1
SPCC1183.04c |pet127||mitochondrial membrane protein Pet127|Schi... 25 7.1
SPBC839.06 |cta3||P-type ATPase, calcium transporting Cta3|Schiz... 25 7.1
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 9.3
SPAC6C3.06c |||P-type ATPase, calcium transporting|Schizosacchar... 25 9.3
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 25 9.3
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G P F FIN I + S + Y DDI ++ K + S + +++ L +L+
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G P F FIN I + S + Y DDI ++ K + S + +++ L +L+
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G P F FIN I + S + Y DDI ++ K + S + +++ L +L+
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G P F FIN I + S + Y DDI ++ K + S + +++ L +L+
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G P F FIN I + S + Y DDI ++ K + S + +++ L +L+
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G P F FIN I + S + Y DDI ++ K + S + +++ L +L+
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G P F FIN I + S + Y DDI ++ K + S + +++ L +L+
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.43
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G P F FIN I + S + Y DDI ++ K + S + +++ L +L+
Sbjct: 534 MPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.57
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G + P F FIN I + S + Y D+I ++ K + S + +++ L +L+
Sbjct: 534 MPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.57
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G + P F FIN I + S + Y D+I ++ K + S + +++ L +L+
Sbjct: 534 MPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.1 bits (62), Expect = 0.57
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +1
Query: 4 VPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEY 183
+P G + P F FIN I + S + Y D+I ++ K + S + +++ L +L+
Sbjct: 534 MPYGISIAPAHFQYFINTILGEVKESHVVCYMDNILIHSK-SESEHVKHVKDVLQKLKN- 591
Query: 184 CHLNKLDLNVSKC 222
L +N +KC
Sbjct: 592 ---ANLIINQAKC 601
>SPMIT.06 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 807
Score = 27.5 bits (58), Expect = 1.8
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDI 60
G PQGS++ P++ NI+++ +
Sbjct: 420 GTPQGSIVSPILANIYLHQL 439
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.6 bits (56), Expect = 3.1
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2
Query: 606 SRLVVGIIHFSFKL 565
SRLVVGI+HF F L
Sbjct: 446 SRLVVGIVHFFFSL 459
>SPBC25B2.11 |pof2||F-box protein Pof2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 3.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 CHLNKLD-LNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGV 324
C +KL+ L +SKC +T + + K + L +L + E D+GV
Sbjct: 274 CKFSKLNSLFLSKCIGLTDSSLLSLTKLSQSLTTLHLGHCYEITDIGV 321
>SPBC16C6.12c |||Las1-like protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
Frame = +1
Query: 469 SILEYCSQVWNPRYKIYINRL----ETIQTKFMRFLQFKTKVYD 588
S+LE C Q +P KI I+ L + ++ KF Q+++ ++D
Sbjct: 364 SVLEICLQRSDPFTKIIIDELSILDKELENKFSPLFQYRSDMFD 407
>SPCC1183.04c |pet127||mitochondrial membrane protein
Pet127|Schizosaccharomyces pombe|chr 3|||Manual
Length = 524
Score = 25.4 bits (53), Expect = 7.1
Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 6/131 (4%)
Frame = +1
Query: 40 NIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEYCHL---NKLDLN 210
NI + ++G + F + D +Y+K SSN +D+ + L ++LD
Sbjct: 203 NIILMNVGKSLETF-FTVDKDQFLLYKKPPSSNGVLKPLKDVFQYGRCSSLLVRSQLDCY 261
Query: 211 VSKC-FAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTH--GRKLSYEKHIDNIVKRA 381
K + F KT V F ++ N + F +TH G ++S+E+ ++++ A
Sbjct: 262 DKKIPESGVFDLKTRAV-FGVRM---NQTQPELFKSYKLTHYYGNRISFEREYFDLIRSA 317
Query: 382 YISLGFIKRLG 414
++ RLG
Sbjct: 318 FMKYSLQARLG 328
>SPBC839.06 |cta3||P-type ATPase, calcium transporting
Cta3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1037
Score = 25.4 bits (53), Expect = 7.1
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Frame = +1
Query: 364 NIVKRAYISLGFIKRLGAQFTSAKIFKVLYC-AYVRSILEYCSQ-----VWNPRYKIYIN 525
N R Y IKR+ + + +Y V ILE CS + P ++ I
Sbjct: 489 NTFVREYPFDSEIKRMAVIYEDQQGQYTVYAKGAVERILERCSTSNGSTLEEPDRELIIA 548
Query: 526 RLETIQTKFMRFLQFKTKVYD 588
++ET+ + +R L TKV D
Sbjct: 549 QMETLAAEGLRVLALATKVID 569
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = -1
Query: 565 EETS*IW-SVWSPIYLYKFY 509
EE W ++W PI LY+FY
Sbjct: 233 EEVETKWMNIWCPIILYEFY 252
>SPAC6C3.06c |||P-type ATPase, calcium
transporting|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1033
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = -2
Query: 630 WKYVMPXTSRLVVGIIHFSFKLKKPHEF 547
WK +P +++ GI+H +K H F
Sbjct: 229 WKLRIPCSNQHTEGIVHADAPIKSVHHF 256
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 25.0 bits (52), Expect = 9.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 585 IHFSFKLKKPHEFGLYGLQSI 523
++F LKKPH+F GL S+
Sbjct: 300 VNFGDLLKKPHDFSADGLLSL 320
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,723,791
Number of Sequences: 5004
Number of extensions: 57206
Number of successful extensions: 180
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 180
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 289756512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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