Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_L02
(646 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 75 6e-14
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 75 6e-14
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 75 6e-14
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 66 3e-11
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 66 3e-11
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 62 8e-10
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 62 8e-10
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 62 8e-10
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 56 4e-08
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 50 2e-06
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 49 6e-06
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 47 2e-05
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 43 4e-04
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 41 0.002
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 38 0.009
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 38 0.009
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 38 0.009
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 38 0.009
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 38 0.009
AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p pro... 38 0.012
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 38 0.015
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 35 0.11
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 35 0.11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 35 0.11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 35 0.11
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 33 0.44
DQ138680-1|ABA86286.1| 169|Drosophila melanogaster CG4764 protein. 29 4.1
AY060789-1|AAL28337.1| 182|Drosophila melanogaster GH25884p pro... 29 4.1
AE014134-210|AAF51410.1| 182|Drosophila melanogaster CG4764-PA ... 29 4.1
AY051622-1|AAK93046.1| 456|Drosophila melanogaster GH27042p pro... 29 5.4
AE014298-950|AAF46198.2| 456|Drosophila melanogaster CG3135-PA ... 29 5.4
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 75.4 bits (177), Expect = 6e-14
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDC-QMIQEDLLRLE 177
GVPQGS+LGP +FNIF +DI + L+ADD VY S ++ Q +Q L L+
Sbjct: 665 GVPQGSVLGPTLFNIFTHDIPQA-TNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELD 723
Query: 178 EYCHLNKLDLNVSKCFAMTFTHKTTPVKF---TYQLIGTNLANVDEFCDLGVTHGRKLSY 348
Y K+ +N +K A+ FT + P +++ + + VD LG+ +KL++
Sbjct: 724 IYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKLTF 783
Query: 349 EKHIDNIVKRAYISL----GFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQVWNPRYKI 516
+ HI+N + + + I R S KI +++ IL Y S VW +
Sbjct: 784 KYHINNTIMKVNKIICTLYPLINRKSKLSISNKI--IIFKTIFNPILMYGSPVWGRCAQT 841
Query: 517 YINRLETIQTKFMRFL 564
+I +L+ Q K ++ +
Sbjct: 842 HIKKLQICQNKLLKLI 857
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 75.4 bits (177), Expect = 6e-14
Identities = 58/197 (29%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDI--GTCFRSSD-----FLLYADDIKVYRKVNSSND-CQMIQ 156
GVPQGS+LGPL++++F D+ + +D YADDI + N N+ + +Q
Sbjct: 640 GVPQGSVLGPLLYSVFTADLPCPNAYHMADPRKALLATYADDIALLYSSNCCNEAARGLQ 699
Query: 157 EDLLRLEEYCHLNKLDLNVSKCFAMTFTHKT-TPVKFTYQLIGTNLANVDEFCDLGVTHG 333
E L L +C L +N K FT KT +PV +L G L + LG+T
Sbjct: 700 EYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSPVTAPIELEGVILDQPSQAKYLGITLD 759
Query: 334 RKLSYEKHIDNIVKRAYISLGFIK-RLGAQFT-SAKIFKVLYCAYVRSILEYCSQVWNPR 507
++L++ H+ +R Y + ++ L + T + + + +Y V I Y Q+W
Sbjct: 760 KRLTFGPHLKATTRRCYQRMQQLRWLLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIA 819
Query: 508 YKIYINRLETIQTKFMR 558
K NR++ +Q + MR
Sbjct: 820 AKSNYNRIQVLQNRAMR 836
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 75.4 bits (177), Expect = 6e-14
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 8/196 (4%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSSNDC-QMIQEDLLRLE 177
GVPQGS+LGP +FNIF +DI + L+ADD VY S ++ Q +Q L L+
Sbjct: 613 GVPQGSVLGPTLFNIFTHDIPQA-TNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELD 671
Query: 178 EYCHLNKLDLNVSKCFAMTFTHKTTPVKF---TYQLIGTNLANVDEFCDLGVTHGRKLSY 348
Y K+ +N +K A+ FT + P +++ + + VD LG+ +KL++
Sbjct: 672 IYYKKWKIKINPNKTNAIFFTKRRKPRYLPDRQLRILDSPIQWVDNIRYLGIIFDKKLTF 731
Query: 349 EKHIDNIVKRAYISL----GFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQVWNPRYKI 516
+ HI+N + + + I R S KI +++ IL Y S VW +
Sbjct: 732 KYHINNTIMKVNKIICTLYPLINRKSKLSISNKI--IIFKTIFNPILMYGSPVWGRCAQT 789
Query: 517 YINRLETIQTKFMRFL 564
+I +L+ Q K ++ +
Sbjct: 790 HIKKLQICQNKLLKLI 805
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 66.5 bits (155), Expect = 3e-11
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTC-----FRSSDFLL--YADDIKVYRKVNSSNDCQM-IQ 156
GVPQGS+LGP ++++F +D+ T D L+ YADD V K S +Q
Sbjct: 641 GVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQ 700
Query: 157 EDLLRLEEYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGR 336
E L +++ + +N KC +TF ++T L G + + + LG+T R
Sbjct: 701 EYLDAFQQWAENWNVRINAEKCANVTFANRTGSCP-GVSLNGRLIRHHQAYKYLGITLDR 759
Query: 337 KLSYEKHIDNIVKRAYISLGFIKRLGAQFTSAKI-FKV-LYCAYVRSILEYCSQVWNPRY 510
KL++ +HI NI + + + L A + KV +Y + + L Y QV+
Sbjct: 760 KLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAA 819
Query: 511 KIYINRLETIQTKFMR 558
K ++N++ +Q K +R
Sbjct: 820 KSHLNKIRILQAKTLR 835
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p protein.
Length = 718
Score = 66.5 bits (155), Expect = 3e-11
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 10/196 (5%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTC-----FRSSDFLL--YADDIKVYRKVNSSNDCQM-IQ 156
GVPQGS+LGP ++++F +D+ T D L+ YADD V K S +Q
Sbjct: 443 GVPQGSVLGPTLYSVFASDMPTHTPVTEVDEEDVLIATYADDTAVLTKSKSILAATSGLQ 502
Query: 157 EDLLRLEEYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGR 336
E L +++ + +N KC +TF ++T L G + + + LG+T R
Sbjct: 503 EYLDAFQQWAENWNVRINAEKCANVTFANRTGSCP-GVSLNGRLIRHHQAYKYLGITLDR 561
Query: 337 KLSYEKHIDNIVKRAYISLGFIKRLGAQFTSAKI-FKV-LYCAYVRSILEYCSQVWNPRY 510
KL++ +HI NI + + + L A + KV +Y + + L Y QV+
Sbjct: 562 KLTFSRHITNIQQAFRTKVARMSWLIAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAA 621
Query: 511 KIYINRLETIQTKFMR 558
K ++N++ +Q K +R
Sbjct: 622 KSHLNKIRILQAKTLR 637
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 61.7 bits (143), Expect = 8e-10
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 4/192 (2%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVY-RKVNSSNDCQMIQEDLLRLE 177
GVPQGS+LGP+++ ++ D + + +ADD + R ++ L +E
Sbjct: 635 GVPQGSVLGPILYTLYTADFPIDYNLTT-STFADDTAILSRSKCPIKATALLSRHLTSVE 693
Query: 178 EYCHLNKLDLNVSKCFAMTFT-HKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSYEK 354
+ ++ +NV KC +TFT +K T L + DE LGV R+L++ K
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNKQTCPPLV--LNNICIPQADEVTYLGVHLDRRLTWRK 751
Query: 355 HIDNIVKRAYISLGFIKRL-GAQFTSAKIFK-VLYCAYVRSILEYCSQVWNPRYKIYINR 528
HI+ K + + L A+ + FK +LY + ++ I Y S++W + I+
Sbjct: 752 HIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDI 811
Query: 529 LETIQTKFMRFL 564
++ Q++ +R +
Sbjct: 812 IQRAQSRILRII 823
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 61.7 bits (143), Expect = 8e-10
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 4/192 (2%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVY-RKVNSSNDCQMIQEDLLRLE 177
GVPQGS+LGP+++ ++ D + + +ADD + R ++ L +E
Sbjct: 635 GVPQGSVLGPILYTLYTADFPIDYNLTT-STFADDTAILSRSKCPIKATALLSRHLTSVE 693
Query: 178 EYCHLNKLDLNVSKCFAMTFT-HKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSYEK 354
+ ++ +NV KC +TFT +K T L + DE LGV R+L++ K
Sbjct: 694 RWLADWRISINVQKCKQVTFTLNKQTCPPLV--LNNICIPQADEVTYLGVHLDRRLTWRK 751
Query: 355 HIDNIVKRAYISLGFIKRL-GAQFTSAKIFK-VLYCAYVRSILEYCSQVWNPRYKIYINR 528
HI+ K + + L A+ + FK +LY + ++ I Y S++W + I+
Sbjct: 752 HIEAKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDI 811
Query: 529 LETIQTKFMRFL 564
++ Q++ +R +
Sbjct: 812 IQRAQSRILRII 823
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 61.7 bits (143), Expect = 8e-10
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 8/196 (4%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIG----TCFRSSDFLLYADDIKV-YRKVNSSNDCQMIQEDL 165
GVPQGS+LGPL++ ++ +D+ + + S +ADD+ V YR + IQ+
Sbjct: 639 GVPQGSVLGPLLYCLYSHDMPQPDVSLYGKSMLATFADDVCVTYRSRCEHDAADGIQDFA 698
Query: 166 LRLEEYCHLNKLDLNVSKCFAMTFTHK-TTPVKFTYQLIGTNLANVDEFCDLGVTHGRKL 342
R E+ + +N SK + FT K TP + + N ++ LGV R+L
Sbjct: 699 YRFSEWARRWNIGINSSKSNNVCFTLKRRTPPPVYIEEVPVPQPNAAKY--LGVLLDRRL 756
Query: 343 SYEKHIDNIVK--RAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQVWNPRYKI 516
++ KH+ +I RA ++ + S +Y + +Y Q+W
Sbjct: 757 TFSKHVTDIRTRLRAKVAKHYWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDS 816
Query: 517 YINRLETIQTKFMRFL 564
+I R++ IQ K R +
Sbjct: 817 HIKRIQAIQNKVARLI 832
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 56.0 bits (129), Expect = 4e-08
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVYRKVNSS-NDCQMIQEDLLRLE 177
GVPQGS+LGP ++ I+ DI T R + +ADD + + S + L+ ++
Sbjct: 637 GVPQGSVLGPTLYLIYTADIPTNSRLT-VSTFADDTAILSRSRSPIQATAQLALYLIDIK 695
Query: 178 EYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSYEKH 357
++ ++ +N KC +TFT L L DE LGV R+L++ +H
Sbjct: 696 KWLSDWRIKVNEQKCKHVTFTLNRQDCP-PLLLNSIPLPKADEVTYLGVHLDRRLTWRRH 754
Query: 358 ID---NIVKRAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQVWNPRYKIYINR 528
I+ +K +L ++ G+ S +LY + ++ I Y SQ+W I+
Sbjct: 755 IEAKKTQLKLKANNLHWLINSGSPL-SLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDI 813
Query: 529 LETIQTKFMR 558
++ Q+K +R
Sbjct: 814 IQRAQSKILR 823
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 50.4 bits (115), Expect = 2e-06
Identities = 44/200 (22%), Positives = 92/200 (46%), Gaps = 8/200 (4%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCF--RSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRL 174
GVPQGS+LGP+++NI + I + R + +ADD+ + + + Q I +
Sbjct: 612 GVPQGSVLGPILWNIMYDGILSISKPRGVELHCFADDVAITAVAKTIPELQDISNVAITA 671
Query: 175 E-EYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSYE 351
E+ L + K + + + + ++ G +A+ + LGV R+LS++
Sbjct: 672 AIEWLEKVGLKIAAHKTEVVLLSSRKSVECMRVEVKGVEIASAETLKYLGVLIDRRLSFK 731
Query: 352 KHIDNIVKRAYISLGFIKRLGAQFTSAKI-FKVLYCAYVRSILEYCSQVWN--PRYKIYI 522
H K+A ++ + R+ ++ + L A ++ L Y + +W+ K Y+
Sbjct: 732 AHARYASKKAAMTAAALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIWSCVSTKKTYL 791
Query: 523 NRLETI-QTKFMRFLQ-FKT 576
+ + +T +R ++ F+T
Sbjct: 792 DSARAVSRTMALRLIRGFRT 811
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 48.8 bits (111), Expect = 6e-06
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFI---NDIGTCFRSSDFLLYADDIKVYRKVNSSNDC-QMIQEDLL 168
G+PQGS L ++F I I NDI T + LYADD ++ K+ + N + E L
Sbjct: 640 GIPQGSPLSVVLFMIAIEDINDIVTRHKDIYISLYADDAIIFTKIKNINTVREKFLEILQ 699
Query: 169 RLEEYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSY 348
+ + + L + KC + K + +V+ LG+T KL +
Sbjct: 700 EINSWGATSGASLAIEKCQTLHICRKQRCNLSDIVFNSRTIKDVNFLKILGITFDPKLLF 759
Query: 349 EKHIDNIVKRAYISLGFIKRLGAQFT 426
++H + K+ IK L ++++
Sbjct: 760 KQHCQTLRKQLETRFNIIKFLSSKYS 785
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 47.2 bits (107), Expect = 2e-05
Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 8/187 (4%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCF---RSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLR 171
G+PQGS + ++F I N + + F YADD + N + + ++L
Sbjct: 632 GIPQGSPISVILFLIAFNKLSNIISLHKEIKFNAYADDFFLIINFNKNTNTNFNLDNLFD 691
Query: 172 -LEEYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTN--LANVDEFCDLGVTHGRKL 342
+E +C + L++SKC + K T ++ N + +V LG+T K
Sbjct: 692 DIENWCSYSGASLSLSKCQHLHICRKR---HCTCKISCNNFQIPSVTSLKILGITLNNKY 748
Query: 343 SYEKHIDNIVKRAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSI--LEYCSQVWNPRYKI 516
+ HI+ ++ + + L IK L + + +L A I LEY ++ K
Sbjct: 749 KWNTHINLLLPKLHNKLNIIKCLSSLKFNCNTHTLLNVAKATIIAKLEYGLFLYGHAPKS 808
Query: 517 YINRLET 537
+N+++T
Sbjct: 809 ILNKIKT 815
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 42.7 bits (96), Expect = 4e-04
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 13/181 (7%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND--IGTCFRSSD-----FLLYADDIKVYRKVNSSNDCQMIQE 159
GVPQGS LGPL+++IF +D + +R S YADD V + E
Sbjct: 697 GVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTQRIMLSTYADDTIVLSSDTLATAATRNNE 756
Query: 160 DLLR-LEEYCHLNKLDLNVSKCFAMTFTHKT-TPV-KFTYQLIGTNLANVDEFCDLGVTH 330
+ L+ ++ + +N +K + FT K P ++ G + + LGVT
Sbjct: 757 NYLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPTNSMNVKIKGQTIKKESKQSYLGVTL 816
Query: 331 GRKLSYEKHIDNIVKR---AYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQVWN 501
KL+ H+ ++ + AY L +I G K ++ + + I +Y W
Sbjct: 817 DSKLTLSSHVTKLLGKYSTAYRKLTWILN-GRSKLPTKTKILILKSVLSPIWQYAIAAWG 875
Query: 502 P 504
P
Sbjct: 876 P 876
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 40.7 bits (91), Expect = 0.002
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND--IGTCFRSSD-----FLLYADDIKVYRKVNSSNDCQMIQE 159
GVPQGS LGPL+++IF +D + +R S YADD V + E
Sbjct: 685 GVPQGSNLGPLLYSIFSSDMPLPYIYRPSPTERIMLSTYADDTIVLSSDTLATAATRNNE 744
Query: 160 DLLR-LEEYCHLNKLDLNVSKCFAMTFTHKT-TPVKF-TYQLIGTNLANVDEFCDLGVTH 330
+ L+ ++ + +N +K + FT K P T ++ G + + LGV
Sbjct: 745 NYLKSFSDWADKWGISVNAAKTGHVIFTLKNDLPTSLRTMKIKGQVIKIESKQSYLGVIL 804
Query: 331 GRKLSYEKHIDNIVKR---AYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQVWN 501
KL+ H+ ++ + AY + +I ++ + K ++ + + I +Y W
Sbjct: 805 DSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPT-KTKMLILKSVLSPIWQYAIAAWG 863
Query: 502 PRY-KIYINRLETIQTKFMR 558
P I R++ + + MR
Sbjct: 864 PLVTDAQIRRIQVEENRKMR 883
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 38.3 bits (85), Expect = 0.009
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND--IGTCFRSSD-----FLLYADDIKVYRKVNSSNDCQMIQE 159
GVPQGS LGP++++IF +D + + S YADD V + E
Sbjct: 569 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 628
Query: 160 DLLR-LEEYCHLNKLDLNVSKCFAMTFTHKT-TPVKF-TYQLIGTNLANVDEFCDLGVTH 330
+ L+ ++ + +N +K + +T K P T ++ G + + LGV
Sbjct: 629 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVIL 688
Query: 331 GRKLSYEKHIDNIVKR---AYISLGFIKRLGAQF-TSAKIFKVLYCAYVRSILEYCSQVW 498
KL+ H+ +V + AY + +I ++ T+ K+ ++ + + I +Y W
Sbjct: 689 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKM--LILKSVLSPIWQYAIAAW 746
Query: 499 NPRY-KIYINRLETIQTKFMR 558
P I R++ + + MR
Sbjct: 747 GPLVTDAQIRRIQVEENRKMR 767
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 38.3 bits (85), Expect = 0.009
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND--IGTCFRSSD-----FLLYADDIKVYRKVNSSNDCQMIQE 159
GVPQGS LGP++++IF +D + + S YADD V + E
Sbjct: 685 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 744
Query: 160 DLLR-LEEYCHLNKLDLNVSKCFAMTFTHKT-TPVKF-TYQLIGTNLANVDEFCDLGVTH 330
+ L+ ++ + +N +K + +T K P T ++ G + + LGV
Sbjct: 745 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVIL 804
Query: 331 GRKLSYEKHIDNIVKR---AYISLGFIKRLGAQF-TSAKIFKVLYCAYVRSILEYCSQVW 498
KL+ H+ +V + AY + +I ++ T+ K+ ++ + + I +Y W
Sbjct: 805 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKM--LILKSVLSPIWQYAIAAW 862
Query: 499 NPRY-KIYINRLETIQTKFMR 558
P I R++ + + MR
Sbjct: 863 GPLVTDAQIRRIQVEENRKMR 883
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 38.3 bits (85), Expect = 0.009
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND--IGTCFRSSD-----FLLYADDIKVYRKVNSSNDCQMIQE 159
GVPQGS LGP++++IF +D + + S YADD V + E
Sbjct: 685 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 744
Query: 160 DLLR-LEEYCHLNKLDLNVSKCFAMTFTHKT-TPVKF-TYQLIGTNLANVDEFCDLGVTH 330
+ L+ ++ + +N +K + +T K P T ++ G + + LGV
Sbjct: 745 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVIL 804
Query: 331 GRKLSYEKHIDNIVKR---AYISLGFIKRLGAQF-TSAKIFKVLYCAYVRSILEYCSQVW 498
KL+ H+ +V + AY + +I ++ T+ K+ ++ + + I +Y W
Sbjct: 805 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKM--LILKSVLSPIWQYAIAAW 862
Query: 499 NPRY-KIYINRLETIQTKFMR 558
P I R++ + + MR
Sbjct: 863 GPLVTDAQIRRIQVEENRKMR 883
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 38.3 bits (85), Expect = 0.009
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND--IGTCFRSSD-----FLLYADDIKVYRKVNSSNDCQMIQE 159
GVPQGS LGP++++IF +D + + S YADD V + E
Sbjct: 647 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 706
Query: 160 DLLR-LEEYCHLNKLDLNVSKCFAMTFTHKT-TPVKF-TYQLIGTNLANVDEFCDLGVTH 330
+ L+ ++ + +N +K + +T K P T ++ G + + LGV
Sbjct: 707 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVIL 766
Query: 331 GRKLSYEKHIDNIVKR---AYISLGFIKRLGAQF-TSAKIFKVLYCAYVRSILEYCSQVW 498
KL+ H+ +V + AY + +I ++ T+ K+ ++ + + I +Y W
Sbjct: 767 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKM--LILKSVLSPIWQYAIAAW 824
Query: 499 NPRY-KIYINRLETIQTKFMR 558
P I R++ + + MR
Sbjct: 825 GPLVTDAQIRRIQVEENRKMR 845
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 38.3 bits (85), Expect = 0.009
Identities = 47/201 (23%), Positives = 87/201 (43%), Gaps = 15/201 (7%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND--IGTCFRSSD-----FLLYADDIKVYRKVNSSNDCQMIQE 159
GVPQGS LGP++++IF +D + + S YADD V + E
Sbjct: 685 GVPQGSNLGPILYSIFSSDMPLPHIYHPSPTERIMLSTYADDTIVLSSDILATAATRNNE 744
Query: 160 DLLR-LEEYCHLNKLDLNVSKCFAMTFTHKT-TPVKF-TYQLIGTNLANVDEFCDLGVTH 330
+ L+ ++ + +N +K + +T K P T ++ G + + LGV
Sbjct: 745 NYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPTNLKTMKIKGQAIKKESKQSYLGVIL 804
Query: 331 GRKLSYEKHIDNIVKR---AYISLGFIKRLGAQF-TSAKIFKVLYCAYVRSILEYCSQVW 498
KL+ H+ +V + AY + +I ++ T+ K+ ++ + + I +Y W
Sbjct: 805 DSKLTLSPHVTKVVGKYLTAYRKMSWILNERSKLPTNTKM--LILKSVLSPIWQYAIAAW 862
Query: 499 NPRY-KIYINRLETIQTKFMR 558
P I R++ + + MR
Sbjct: 863 GPLVTDAQIRRIQVEENRKMR 883
>AY071740-1|AAL49362.1| 184|Drosophila melanogaster RH47344p
protein.
Length = 184
Score = 37.9 bits (84), Expect = 0.012
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDI--GTCFRSSDFLLYADDIK--VYRKVNSSNDCQMIQEDLL 168
GVPQGS+LGPL++N + I S+ + +ADD+ V K + +M ++
Sbjct: 50 GVPQGSVLGPLLWNTMYDGILRLPLVGRSEIVGFADDVALLVVDKYPGKAE-EMCNRNIR 108
Query: 169 RLEEYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSY 348
+E + L+L K A+ + + T ++ GT +++ L V +LS+
Sbjct: 109 AIEHWLSSMGLELAPEKTKAVLISSRKAVETATVEVGGTLVSSSRAIKYLEVMIDTRLSF 168
Query: 349 EKHI 360
+H+
Sbjct: 169 REHL 172
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 37.5 bits (83), Expect = 0.015
Identities = 16/38 (42%), Positives = 27/38 (71%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKV 114
GVPQGS+LGP+++ ++ DI T ++ + F +ADD +
Sbjct: 176 GVPQGSVLGPILYTLYTADIPTNYQLTIF-TFADDTAI 212
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 34.7 bits (76), Expect = 0.11
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND-----IGTCFRSSDF----------LLYADDIKVYRKVNSS 135
GVPQGS+LGP++++I+ +D + R+ F YADD + + +
Sbjct: 241 GVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYT 300
Query: 136 NDCQMIQEDLLRLEEYCHLNK---LDLNVSKCFAMTFTHKTTPVK-FTYQLI-GTNLANV 300
+ ++ L + +C +K + +N K + F+ K +T LI G A +
Sbjct: 301 KLAINLNQNYLNV--FCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKL 358
Query: 301 DEFCDLGVTHGRKLSYEKHIDNIVKR---AYISLGFIKRLGAQF-TSAKIFKVLYCAYVR 468
++ LG+ R+L++ H+ + + AY L ++ + +AKI +L+ V
Sbjct: 359 NKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKI--LLWKQIVS 416
Query: 469 SILEYCSQVWNPRYK-IYINRLETIQTKFMR 558
I Y +W +++T++ K++R
Sbjct: 417 PIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 447
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.11
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND-----IGTCFRSSDF----------LLYADDIKVYRKVNSS 135
GVPQGS+LGP++++I+ +D + R+ F YADD + + +
Sbjct: 688 GVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYT 747
Query: 136 NDCQMIQEDLLRLEEYCHLNK---LDLNVSKCFAMTFTHKTTPVK-FTYQLI-GTNLANV 300
+ ++ L + +C +K + +N K + F+ K +T LI G A +
Sbjct: 748 KLAINLNQNYLNV--FCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKL 805
Query: 301 DEFCDLGVTHGRKLSYEKHIDNIVKR---AYISLGFIKRLGAQF-TSAKIFKVLYCAYVR 468
++ LG+ R+L++ H+ + + AY L ++ + +AKI +L+ V
Sbjct: 806 NKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKI--LLWKQIVS 863
Query: 469 SILEYCSQVWNPRYK-IYINRLETIQTKFMR 558
I Y +W +++T++ K++R
Sbjct: 864 PIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.11
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND-----IGTCFRSSDF----------LLYADDIKVYRKVNSS 135
GVPQGS+LGP++++I+ +D + R+ F YADD + + +
Sbjct: 688 GVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYT 747
Query: 136 NDCQMIQEDLLRLEEYCHLNK---LDLNVSKCFAMTFTHKTTPVK-FTYQLI-GTNLANV 300
+ ++ L + +C +K + +N K + F+ K +T LI G A +
Sbjct: 748 KLAINLNQNYLNV--FCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKL 805
Query: 301 DEFCDLGVTHGRKLSYEKHIDNIVKR---AYISLGFIKRLGAQF-TSAKIFKVLYCAYVR 468
++ LG+ R+L++ H+ + + AY L ++ + +AKI +L+ V
Sbjct: 806 NKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKI--LLWKQIVS 863
Query: 469 SILEYCSQVWNPRYK-IYINRLETIQTKFMR 558
I Y +W +++T++ K++R
Sbjct: 864 PIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 34.7 bits (76), Expect = 0.11
Identities = 48/211 (22%), Positives = 95/211 (45%), Gaps = 25/211 (11%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFIND-----IGTCFRSSDF----------LLYADDIKVYRKVNSS 135
GVPQGS+LGP++++I+ +D + R+ F YADD + + +
Sbjct: 688 GVPQGSILGPVLYSIYSSDMPYPIVKDYMRNISFPDYHPTNIILATYADDTIILSRSKYT 747
Query: 136 NDCQMIQEDLLRLEEYCHLNK---LDLNVSKCFAMTFTHKTTPVK-FTYQLI-GTNLANV 300
+ ++ L + +C +K + +N K + F+ K +T LI G A +
Sbjct: 748 KLAINLNQNYLNV--FCRWSKKWDIAINAKKTGHILFSLKKEQTNIYTPPLINGQRAAKL 805
Query: 301 DEFCDLGVTHGRKLSYEKHIDNIVKR---AYISLGFIKRLGAQF-TSAKIFKVLYCAYVR 468
++ LG+ R+L++ H+ + + AY L ++ + +AKI +L+ V
Sbjct: 806 NKQRYLGLMLDRRLTFCAHMTLLKGKTIAAYKKLEWLIGKNSHLPKNAKI--LLWKQIVS 863
Query: 469 SILEYCSQVWNPRYK-IYINRLETIQTKFMR 558
I Y +W +++T++ K++R
Sbjct: 864 PIWHYAIAIWGSLVSDTQAKKIQTMENKYIR 894
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 32.7 bits (71), Expect = 0.44
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 4/170 (2%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRS-SDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLE 177
G PQGS+ GP +++I ++ + + YADD+ + + NS + L+ +
Sbjct: 631 GCPQGSISGPFIWDILMDVLLQRLQPYCQLSAYADDLLLLVEGNSRAVLEEKGAQLMSIV 690
Query: 178 EYCHLNKLD-LNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSYEK 354
E D L+ SK M T + G NL V LG+T + +
Sbjct: 691 ETWGAEVGDCLSTSKTVIMLLKGALRRAP-TVRFAGRNLPYVRSCRYLGITVSEGMKFLT 749
Query: 355 HIDNIVKRAYISLGFIKR-LGAQF-TSAKIFKVLYCAYVRSILEYCSQVW 498
HI ++ +R +G + R L A + S + + +Y + + + + VW
Sbjct: 750 HIASLRQRMTGVVGALARVLRADWGFSPRARRTIYDGLMAPCVLFGAPVW 799
>DQ138680-1|ABA86286.1| 169|Drosophila melanogaster CG4764 protein.
Length = 169
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 193 NKLDLNVSKCFAMTFTHKTTPVKFTYQLIG 282
N LD NV F + TT V + YQLIG
Sbjct: 133 NPLDTNVVPSFVLMDIQSTTVVTYVYQLIG 162
>AY060789-1|AAL28337.1| 182|Drosophila melanogaster GH25884p
protein.
Length = 182
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 193 NKLDLNVSKCFAMTFTHKTTPVKFTYQLIG 282
N LD NV F + TT V + YQLIG
Sbjct: 140 NPLDTNVVPSFVLMDIQSTTVVTYVYQLIG 169
>AE014134-210|AAF51410.1| 182|Drosophila melanogaster CG4764-PA
protein.
Length = 182
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 193 NKLDLNVSKCFAMTFTHKTTPVKFTYQLIG 282
N LD NV F + TT V + YQLIG
Sbjct: 140 NPLDTNVVPSFVLMDIQSTTVVTYVYQLIG 169
>AY051622-1|AAK93046.1| 456|Drosophila melanogaster GH27042p
protein.
Length = 456
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 294 CQIGSYKLICELNRCSLMCEGHGKTLRN 211
C G Y L CE ++C + C+ G+ + N
Sbjct: 365 CSKGYYGLRCEYSKCVIPCKNEGRCIGN 392
>AE014298-950|AAF46198.2| 456|Drosophila melanogaster CG3135-PA
protein.
Length = 456
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -2
Query: 294 CQIGSYKLICELNRCSLMCEGHGKTLRN 211
C G Y L CE ++C + C+ G+ + N
Sbjct: 365 CSKGYYGLRCEYSKCVIPCKNEGRCIGN 392
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,728,741
Number of Sequences: 53049
Number of extensions: 585666
Number of successful extensions: 1127
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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