Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_L02
(646 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 79 4e-15
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 69 3e-12
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 47 1e-05
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 41 9e-04
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 40 0.002
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 29 3.7
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 29 3.7
AL032618-2|CAA21485.1| 640|Caenorhabditis elegans Hypothetical ... 29 3.7
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 29 3.7
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 28 4.9
Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical p... 28 6.5
Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical pr... 28 6.5
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 27 8.6
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 78.6 bits (185), Expect = 4e-15
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 6/218 (2%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCF-RSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLE 177
GVPQG++L PL+F I++NDI + +ADD K+Y + +Q L +
Sbjct: 76 GVPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYASTPKTESENNLQSALDAVV 135
Query: 178 EYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSYEKH 357
++ +KL LN SK +T + + F Y L G + DLG KL + H
Sbjct: 136 DWTKGSKLTLNQSKTVHVTVGKRR--IDFKYHLDGYPIERKAITRDLGFLISEKLDFSDH 193
Query: 358 IDNIVKRAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQVWNPRYKIYINRLET 537
+ A L + + ++ K+ +LY ++R LEY + V +P K +E+
Sbjct: 194 WRKCINLAKFQLANMFNKYST-SNKKLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIES 252
Query: 538 IQTKFMRFLQFK-TKVY----DPDYETRCXRHHILPLE 636
+Q F R L + K Y D DY+T R+ + L+
Sbjct: 253 VQNAFTRRLYSRINKRYFNPTDKDYKTAMERNELFDLQ 290
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 68.9 bits (161), Expect = 3e-12
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 4/206 (1%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRSS-DFLLYADDIKVYRKVNSSNDCQMIQEDLLRLE 177
GVPQGS+ GPL+F +FIN++ + + +ADD+K++ D +IQ + +
Sbjct: 880 GVPQGSVSGPLLFILFINNLLIDLAPTINISCFADDVKIFH-----TDPTIIQNSIDIIV 934
Query: 178 EYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSYEKH 357
+ LN+L L +K + T +Y + G + DLG+ KL +E H
Sbjct: 935 SWSKLNELPLAPTKSALLAL--GTRNKNQSYSVDGVPITPSSTVRDLGLITDCKLKFEHH 992
Query: 358 IDNIVKRAYISLGFIKRLGAQFT--SAKIFKVLYCAYVRSILEYCSQVWNPRYKIYIN-R 528
IVK + +++ K++ F+ S K + LY YV I+ YCS+V+ P ++ +
Sbjct: 993 ---IVKVSCLAMLRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCSEVYAPHSNSVLSAK 1049
Query: 529 LETIQTKFMRFLQFKTKVYDPDYETR 606
LE F + + + YE R
Sbjct: 1050 LEQPLRHFTKRVLQRCNTKFSSYENR 1075
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 46.8 bits (106), Expect = 1e-05
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 5/184 (2%)
Frame = +1
Query: 100 DDIKVYRKVNSSNDCQMIQEDLLRLEEYCHLNKLDLNVSKCFAMTFTHKTTPVKFTYQLI 279
DD K+Y + +Q L + ++ KL L+ SK +T F Y L
Sbjct: 80 DDTKLYVSTPKAETENNLQAALDAVVDWTRGAKLTLSQSKTVHVTVGRCRKD--FKYHLD 137
Query: 280 GTNLANVDEFCDLGVTHGRKLSYEKHIDNIVKRAYISLGFIKRLGAQFTSAKIFKVLYCA 459
G + DLG KL + +H + A L I + ++ K+ +LY
Sbjct: 138 GYPIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYST-SNKKLMILLYKT 196
Query: 460 YVRSILEYCSQVWNPRYKIYINRLETIQTKFMRFLQFKTK-----VYDPDYETRCXRHHI 624
++R LEY + V +P K +E++Q F R L + K D DY+T R+ +
Sbjct: 197 FIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTRRLYSRIKKRYINPTDKDYKTSMERNEL 256
Query: 625 LPLE 636
L+
Sbjct: 257 FNLQ 260
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 40.7 bits (91), Expect = 9e-04
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRSS-DFLLYADDIKVYRKVNSSNDCQMIQEDLLRLE 177
GVP+GS+ GP +F IFIN + S +ADD+KVY S+ +IQ + +
Sbjct: 56 GVPKGSVSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY-----SHSPPLIQTTIDLIT 110
Query: 178 EYCHLNKLDLNVSK 219
+ NKL L V K
Sbjct: 111 TWSENNKLPLAVHK 124
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 39.9 bits (89), Expect = 0.002
Identities = 48/222 (21%), Positives = 87/222 (39%), Gaps = 9/222 (4%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTCFRSSDFLLYADDIKVY-RKVNSSNDCQMIQEDLLRLE 177
GVPQGS++ P +F ++ D+ T + + + YADD+ + R + +Q + +
Sbjct: 532 GVPQGSVISPNLFTFYLKDMPT-QQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIA 590
Query: 178 EYCHLNKLDLNVSKCFAMTFT-----HKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKL 342
+Y + ++ K F+ HKT P + + N + LG+T
Sbjct: 591 KYLKERGMSISAEKSTVTVFSCDPKEHKTKP-DIYWMDDPIPVINAPKL--LGITLNTMT 647
Query: 343 SYEKHIDNIVKRAYISLGFIKRLGAQFTSAKIFKVLYC--AYVRSILEYCSQVWNPRYK- 513
+ H+ N +K IK + +LY A ++ Y + W
Sbjct: 648 GTKDHVGNAIKSMQNKTRVIKSMAGTSWGNDRETMLYTTQALIKPTALYGAPAWTSLLSD 707
Query: 514 IYINRLETIQTKFMRFLQFKTKVYDPDYETRCXRHHILPLEE 639
+ +LE +R TK D+ + R +LPL+E
Sbjct: 708 TNLEKLEIAYRSALRACVGLTKDTPTDHIYQECR--VLPLKE 747
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
protein 19,isoform a protein.
Length = 1783
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 40 NIFINDIGT-CFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEYCHLNKLD 204
N+ +N GT CF ++ F L ++K+Y + N + ++ + R+ + H + LD
Sbjct: 1436 NMPLNSDGTVCFNATLFALVRTNLKIYTEGNIDEANEQLRSAIKRIWKRTHKDLLD 1491
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
protein 19,isoform b protein.
Length = 1877
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 40 NIFINDIGT-CFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEYCHLNKLD 204
N+ +N GT CF ++ F L ++K+Y + N + ++ + R+ + H + LD
Sbjct: 1436 NMPLNSDGTVCFNATLFALVRTNLKIYTEGNIDEANEQLRSAIKRIWKRTHKDLLD 1491
>AL032618-2|CAA21485.1| 640|Caenorhabditis elegans Hypothetical
protein Y42A5A.2 protein.
Length = 640
Score = 28.7 bits (61), Expect = 3.7
Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +1
Query: 193 NKLDLNVSKCFAMTFTHKTTPVKFTYQLIGTNLANVDEFCDLGVTHGRKLSYEKHIDNIV 372
NK++ + S FA + PVK T++ +A+V + +T G L+ +HID ++
Sbjct: 340 NKMEYSASYGFADIL--QNIPVKTTHRY---RIASVSKLVT-AMTIGELLADYRHID-LL 392
Query: 373 KRAYISLGFIKRLGAQFTSAKIFKVLYCAYVRSILEYCSQVWNPRYKIYINRLETIQTKF 552
+ G + + + L + +LE+ S W K +RLE QT+F
Sbjct: 393 TPVFGPAGILSDV-----CSPCHPYLLHVRIIHLLEHSSGAWPHTSKFEFDRLEQNQTEF 447
Query: 553 -MRFLQFKTKVYDP 591
MR +Q + + P
Sbjct: 448 LMRVVQHEFPILFP 461
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 40 NIFINDIGT-CFRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLLRLEEYCHLNKLD 204
N+ +N GT CF ++ F L ++K+Y + N + ++ + R+ + H + LD
Sbjct: 1436 NMPLNSDGTVCFNATLFALVRTNLKIYTEGNIDEANEQLRSAIKRIWKRTHKDLLD 1491
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 1 GVPQGSLLGPLMFNIFINDIGTC----FRSSDFLLYADDIKVYRKVNSSNDCQMIQEDLL 168
G P+GS MF +FIN + C S ++D+++Y S++ MI++ L
Sbjct: 950 GAPRGSESRQFMFLVFINSL-LCEIPINISCSACAISEDLEIY-----SHEPIMIEKSLR 1003
Query: 169 RLEEYCHLNKLDLN 210
++E++ NKL ++
Sbjct: 1004 KIEDWSTSNKLTID 1017
>Z70686-10|CAD21656.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 VKFTYQLIGTNLANVDEFCDLGVTHGRKLS-YEKHIDNIVK 375
+K YQ +GTN DE DL H K S +EK +VK
Sbjct: 447 IKEGYQFLGTNQVVHDELFDLVAYHEMKNSNFEKSCHFVVK 487
>Z70683-8|CAD21626.1| 533|Caenorhabditis elegans Hypothetical
protein F13B12.6 protein.
Length = 533
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 256 VKFTYQLIGTNLANVDEFCDLGVTHGRKLS-YEKHIDNIVK 375
+K YQ +GTN DE DL H K S +EK +VK
Sbjct: 447 IKEGYQFLGTNQVVHDELFDLVAYHEMKNSNFEKSCHFVVK 487
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 27.5 bits (58), Expect = 8.6
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 388 IYRLFSLYCLYASHKTVSYH 329
+YRLF +Y L H+T++Y+
Sbjct: 564 LYRLFFVYTLLEDHQTIAYY 583
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,032,609
Number of Sequences: 27780
Number of extensions: 317248
Number of successful extensions: 869
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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