Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_K24
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000617-1|AAH00617.1| 264|Homo sapiens NADH dehydrogenase (ubi... 287 2e-77
AF200954-1|AAG17541.1| 264|Homo sapiens NADH dehydrogenase-ubiq... 287 2e-77
AF100743-1|AAD40386.1| 263|Homo sapiens NADH-Ubiquinone reducta... 287 2e-77
AF067139-1|AAC27451.1| 264|Homo sapiens NADH:ubiquinone oxidore... 287 2e-77
AK223255-1|BAD96975.1| 264|Homo sapiens NADH dehydrogenase (ubi... 286 6e-77
AL135819-1|CAB63881.1| 190|Homo sapiens hypothetical protein pr... 250 4e-66
BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for IM... 30 7.3
>BC000617-1|AAH00617.1| 264|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q
reductas protein.
Length = 264
Score = 287 bits (705), Expect = 2e-77
Identities = 129/182 (70%), Positives = 155/182 (85%)
Frame = +2
Query: 173 LRKKPPXQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 352
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 34 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 93
Query: 353 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 532
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 94 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 153
Query: 533 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVXVRYD 712
+SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYV +RYD
Sbjct: 154 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYD 213
Query: 713 DE 718
DE
Sbjct: 214 DE 215
>AF200954-1|AAG17541.1| 264|Homo sapiens NADH
dehydrogenase-ubiquinone 30 kDa subunit protein.
Length = 264
Score = 287 bits (705), Expect = 2e-77
Identities = 129/182 (70%), Positives = 155/182 (85%)
Frame = +2
Query: 173 LRKKPPXQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 352
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 34 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 93
Query: 353 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 532
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 94 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 153
Query: 533 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVXVRYD 712
+SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYV +RYD
Sbjct: 154 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYD 213
Query: 713 DE 718
DE
Sbjct: 214 DE 215
>AF100743-1|AAD40386.1| 263|Homo sapiens NADH-Ubiquinone reductase
protein.
Length = 263
Score = 287 bits (705), Expect = 2e-77
Identities = 129/182 (70%), Positives = 155/182 (85%)
Frame = +2
Query: 173 LRKKPPXQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 352
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 33 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 92
Query: 353 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 532
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 93 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 152
Query: 533 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVXVRYD 712
+SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYV +RYD
Sbjct: 153 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYD 212
Query: 713 DE 718
DE
Sbjct: 213 DE 214
>AF067139-1|AAC27451.1| 264|Homo sapiens NADH:ubiquinone
oxidoreductase NDUFS3 subunit protein.
Length = 264
Score = 287 bits (705), Expect = 2e-77
Identities = 129/182 (70%), Positives = 155/182 (85%)
Frame = +2
Query: 173 LRKKPPXQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 352
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 34 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 93
Query: 353 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 532
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 94 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 153
Query: 533 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVXVRYD 712
+SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYV +RYD
Sbjct: 154 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYD 213
Query: 713 DE 718
DE
Sbjct: 214 DE 215
>AK223255-1|BAD96975.1| 264|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q
reductas protein.
Length = 264
Score = 286 bits (701), Expect = 6e-77
Identities = 128/182 (70%), Positives = 155/182 (85%)
Frame = +2
Query: 173 LRKKPPXQETRPTVAKLDPLQKAQLVDFGKYVADCLPKYVQKVQLTAGNELEVLIPPDAV 352
+R++ +TRPTV + + QL FG+YVA+ LPKYVQ+VQ++ NELEV I PD V
Sbjct: 34 VRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGV 93
Query: 353 IPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILSLRYNARIRVKTYTDELTPV 532
IPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LSLR+N+RIRVKTYTDELTP+
Sbjct: 94 IPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPI 153
Query: 533 DSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVXVRYD 712
+SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGFEGHPF+KDFPLSGYV +RYD
Sbjct: 154 ESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFQKDFPLSGYVELRYD 213
Query: 713 DE 718
DE
Sbjct: 214 DE 215
>AL135819-1|CAB63881.1| 190|Homo sapiens hypothetical protein
protein.
Length = 190
Score = 250 bits (612), Expect = 4e-66
Identities = 110/141 (78%), Positives = 128/141 (90%)
Frame = +2
Query: 296 KVQLTAGNELEVLIPPDAVIPVLSFLKDHHSAQFANLVDIAGMDVPSRSNRFEIIYNILS 475
+VQ++ NELEV I PD VIPVL+FL+DH +AQF +LVD+ +DVP+R NRFEI+YN+LS
Sbjct: 1 QVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLS 60
Query: 476 LRYNARIRVKTYTDELTPVDSACDVFKAANWYEREIWDMYGVFFANHPDLRRILTDYGFE 655
LR+N+RIRVKTYTDELTP++SA VFKAANWYEREIWDM+GVFFANHPDLRRILTDYGFE
Sbjct: 61 LRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFE 120
Query: 656 GHPFRKDFPLSGYVXVRYDDE 718
GHPFRKDFPLSGYV +RYDDE
Sbjct: 121 GHPFRKDFPLSGYVELRYDDE 141
>BC034980-1|AAH34980.1| 603|Homo sapiens Unknown (protein for
IMAGE:4824581) protein.
Length = 603
Score = 30.3 bits (65), Expect = 7.3
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +1
Query: 163 ATKSTEKTPXTRDTTYCSQIRSTPKGAARRLRQICS*LSTQVCAE-STADCRQRTRGAHS 339
++KST+ T R + RS + AR ++ + T ++ S C QR RG HS
Sbjct: 69 SSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQR-RGTHS 127
Query: 340 SGRS--HPGFILFEGPPQRSVC*PCRYRWHG 426
GR+ G + P R+ P R R HG
Sbjct: 128 RGRTPGRRGSRSSKRSPSRAST-PGRIRTHG 157
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,019,026
Number of Sequences: 237096
Number of extensions: 2186736
Number of successful extensions: 8535
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8535
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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