Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_K20
(801 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 53 1e-08
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 49 1e-07
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 49 2e-07
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 49 2e-07
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 48 3e-07
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 46 2e-06
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 46 2e-06
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 41 4e-05
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 41 4e-05
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 41 5e-05
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 40 1e-04
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 40 1e-04
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 38 5e-04
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 37 6e-04
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 37 8e-04
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 36 0.001
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 31 0.055
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 52.8 bits (121), Expect = 1e-08
Identities = 23/48 (47%), Positives = 34/48 (70%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRKSKSTI 13
+SYRPI L SVL K+ E L++ RL +E+ +++ QYGFRK +ST+
Sbjct: 488 SSYRPICLLSVLGKILERLIQRRLTTHLESTGGLSDPQYGFRKGRSTV 535
Score = 35.5 bits (78), Expect = 0.002
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = -2
Query: 425 LCLLNTGSPTRRTKPNEKPSAVDLSICTPDLASSHSWYTLSSTFGSDH 282
L LLN G+ + N + S VD+S C+P L ++W T SDH
Sbjct: 159 LVLLNQGNQSTWIGANGRNSIVDVSFCSPSLVGDNNWRVCDET-PSDH 205
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 49.2 bits (112), Expect = 1e-07
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = -2
Query: 515 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGS-PTRRTKPNEKPSAVDLSICTP 339
GDFN H +G + G L++++++ L +LN GS PT + +PS +D++ TP
Sbjct: 122 GDFNAWHTEWGSRRNNLRGEELLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDVTFATP 181
Query: 338 DLASSHSWYTLSSTFGSDH 282
L +W L SDH
Sbjct: 182 SLVLHDTWEVLDFA-RSDH 199
Score = 43.2 bits (97), Expect = 1e-05
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNF--IANSQYGFRKSKST 16
+SYRP+++ L KV E L+ NRL +E+ + ++++QYGFR+ +ST
Sbjct: 502 SSYRPLSMLDALGKVLEQLILNRLNKHLEDPDSPRLSDAQYGFRRGRST 550
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 48.8 bits (111), Expect = 2e-07
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = -1
Query: 153 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRKSKST 16
SYRPI+L S L K+ E L+++R+ NNN I SQ+GFR S ST
Sbjct: 1 SYRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFRPSLST 46
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 48.8 bits (111), Expect = 2e-07
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNRLEWFIEN--NNFIANSQYGFRKSKSTIIG 7
+S+RP+ + + L KV E L+ NRL F+EN + ++ +QYGFR+ KST+ G
Sbjct: 508 SSFRPLGMLNGLGKVLERLILNRLNEFLENGETSHLSPNQYGFRRGKSTVQG 559
Score = 46.0 bits (104), Expect = 1e-06
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = -2
Query: 515 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRT-KPNEKPSAVDLSICTP 339
GDFN H+ +G T G L+ ++ L +LN G+ + T + S +D++ +P
Sbjct: 120 GDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVLNRGNTSTFTGRGIAGESVIDVTFASP 179
Query: 338 DLASSHSWYTLSSTFGSDH 282
+ ++W L S + SDH
Sbjct: 180 SIVRYNTWEVLKSYWYSDH 198
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 48.0 bits (109), Expect = 3e-07
Identities = 27/78 (34%), Positives = 41/78 (52%)
Frame = -2
Query: 515 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPD 336
GDFN +G +T+ G ++E NL L+N G + N + S +DL+ C+P
Sbjct: 119 GDFNAWATEWGSKSTNARGNAVLEHFSRLNLVLVNVGFCPTFVR-NSRTSIIDLTFCSPA 177
Query: 335 LASSHSWYTLSSTFGSDH 282
LASS +W ++ SDH
Sbjct: 178 LASSMNWRVSNAYTLSDH 195
Score = 43.6 bits (98), Expect = 7e-06
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = -1
Query: 165 NDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRKSKST 16
+D ++ RP+AL K+ E L+ NRL + E + +++ Q+GFRK +ST
Sbjct: 465 DDASALRPLALIDNFAKILEILILNRLVVYTEGEHGLSDRQFGFRKGRST 514
Score = 23.8 bits (49), Expect = 6.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 221 VKYKLNNADWSAFKNLVESMMLP 153
VK N+A+W A + MM+P
Sbjct: 546 VKNAFNSANWEAIHAALSKMMIP 568
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 45.6 bits (103), Expect = 2e-06
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNF--IANSQYGFRKSKSTI 13
+SYRP+ + L KV E L+ NRL IE + ++++QYGFR+ +STI
Sbjct: 563 SSYRPLCMLDALGKVLERLILNRLNRHIEQQDSPQLSDAQYGFRRGRSTI 612
Score = 41.9 bits (94), Expect = 2e-05
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -2
Query: 515 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTG-SPTRRTKPNEKPSAVDLSICTP 339
GDFN H+ +G G G+ L++ ++ L +LN G PT + S +D+S +
Sbjct: 185 GDFNAWHEEWGSGRNGQRGIELLQTVETLGLSILNQGRKPTFIGRGFAASSVIDVSFASR 244
Query: 338 DLASSHSWYTLSSTFGSDH 282
++ +W + + SDH
Sbjct: 245 EIVRPDTWSVIPFS-RSDH 262
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 45.6 bits (103), Expect = 2e-06
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = -1
Query: 195 LVCI*EPCRINDVA-SYRPIALSSVLTKVAEHLVKNRLEWFIEN--NNFIANSQYGFRKS 25
LV I +P + + V+ SYRP+ + L KV E L+ NRL F+E+ + +++ QYGFR+
Sbjct: 474 LVLIPKPGKPSGVSCSYRPLCMLDALGKVLERLILNRLHEFLEDPESPRLSDRQYGFRRG 533
Query: 24 KSTI 13
STI
Sbjct: 534 CSTI 537
Score = 37.5 bits (83), Expect = 5e-04
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -2
Query: 515 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSP-TRRTKPNEKPSAVDLSICTP 339
GDFN H +G G L+ + +L +LN G+ T S VD++ TP
Sbjct: 123 GDFNAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVDVAFATP 182
Query: 338 DLASSHSWYTLSSTFGSDH 282
+A +W SDH
Sbjct: 183 TIAQPGTWNVCGDYSYSDH 201
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 41.1 bits (92), Expect = 4e-05
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNRLEWFIE--NNNFIANSQYGFRKSKSTI 13
+SYRP+ + L KV E L+ NRL +E ++ +++ Q+GFR+ +ST+
Sbjct: 548 SSYRPLCMLDALGKVLERLILNRLNEHLEEPSSPRLSDRQFGFRRGRSTV 597
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 41.1 bits (92), Expect = 4e-05
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = -2
Query: 515 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTG-SPTRRTKPNEKPSAVDLSICTP 339
GD N H +G T+ G +V+++D L +LNTG +PT +PS VD++ +
Sbjct: 120 GDLNAWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVAFASS 179
Query: 338 DLAS-----SHSWYTLSSTFGSDH 282
+A H W +S S+H
Sbjct: 180 SIAGVNTIPEHRWRIISIYSYSNH 203
Score = 36.7 bits (81), Expect = 8e-04
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNF--IANSQYGFRKSKSTI 13
+S+RPI L + KV E L+ +R+ IE+ +A +QYGFR+ +ST+
Sbjct: 494 SSFRPILLLNNPGKVYERLLLSRINDVIEDPESPRLAENQYGFRRGRSTV 543
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 40.7 bits (91), Expect = 5e-05
Identities = 17/48 (35%), Positives = 32/48 (66%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRKSKSTI 13
+++RP+ L L KV E ++ +RL + E + +++ Q+GFRK +ST+
Sbjct: 529 SAFRPLGLVDNLAKVQEMVILDRLTKYTEGPHGLSDRQFGFRKKRSTV 576
Score = 35.9 bits (79), Expect = 0.001
Identities = 22/78 (28%), Positives = 37/78 (47%)
Frame = -2
Query: 515 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGSPTRRTKPNEKPSAVDLSICTPD 336
GDFN +G T++ G ++E + L N G+ T N++ S VD++ C+
Sbjct: 117 GDFNAWAVEWGSKRTNSRGDAVLESFARLGVTLGNAGT-TPTFNRNKRTSIVDITFCSTT 175
Query: 335 LASSHSWYTLSSTFGSDH 282
L+ +W + SDH
Sbjct: 176 LSERLNWRVSDALTLSDH 193
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 39.5 bits (88), Expect = 1e-04
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -1
Query: 153 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFI--ANSQYGFRKSKSTI 13
SYRP+ + L KV E L+ NRL +E+ + ++ Q+GFR+ +STI
Sbjct: 556 SYRPLCMLDALGKVLEKLILNRLHNHLEDPAAVRLSDRQHGFRRGRSTI 604
Score = 37.5 bits (83), Expect = 5e-04
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Frame = -2
Query: 656 SNDAINIVGIKIYNISIVSIY----LARXXXXXXXXXXXXXXXXXXXXXXLGDFNCHHQM 489
S+D ++ K+ I+ +S Y L+R GDFN H+
Sbjct: 128 SSDVPGLIAAKVGGITFLSCYAPPSLSREGFAEFVEAIELEAQSHPQVVVAGDFNAWHEE 187
Query: 488 FGCGTTDTNGVHLVEILDLQNLCLLNTGS-PTRRTKPNEKPSAVDLSICTPDLASSHSWY 312
+G ++ G L+E L L+N G+ T S VD++ + +A +W
Sbjct: 188 WGSRRSNERGEVLLEASQQLGLLLMNRGNVATFVGNGVATASVVDVTFASSSIAQPSTWL 247
Query: 311 TLSSTFGSDH 282
++ SDH
Sbjct: 248 VRNTDTRSDH 257
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 39.5 bits (88), Expect = 1e-04
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2
Query: 515 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLNTGS-PTRRTKPNEKPSAVDLSICTP 339
GDFN H +G G L++++ L ++N+G+ PT + S +D+ TP
Sbjct: 142 GDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVINSGNEPTFIGRGAATSSVIDVCFATP 201
Query: 338 DLASSHSW 315
+A +W
Sbjct: 202 SIARPETW 209
Score = 38.7 bits (86), Expect = 2e-04
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNR-LEWFIENNNFIANSQYGFRKSKSTI 13
+SYRP+ + L KV E L+ NR LE ++ ++++QYGFR+ +STI
Sbjct: 510 SSYRPLCMLDALGKVLERLILNRHLE--DPDSPQLSDAQYGFRRGRSTI 556
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 37.5 bits (83), Expect = 5e-04
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNRLEWFIEN--NNFIANSQYGFRKSKSTI 13
+S+RPI L K E L+ NRL +IE+ + ++ Q+GFR+ +ST+
Sbjct: 497 SSFRPICLLDNTGKALERLLLNRLNEYIEDPESPQLSEQQFGFRRGRSTL 546
Score = 29.9 bits (64), Expect = 0.096
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -2
Query: 515 GDFNCHHQMFGCGTTDTNGVHLVEILDLQNLCLLN 411
GDFN H +G T G+ L+++ D L LLN
Sbjct: 121 GDFNAMHLDWGSSRTCPKGLELLQLADNLGLVLLN 155
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 37.1 bits (82), Expect = 6e-04
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -1
Query: 171 RINDVASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRKSKST 16
R + S RPI L + K E ++ +RL IE ++ +QYGFRK ++T
Sbjct: 472 RPGESGSSRPICLIDGVAKGLERVILHRLNNHIERVQGLSENQYGFRKGRAT 523
Score = 30.3 bits (65), Expect = 0.072
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2
Query: 425 LCLLNTGSPTRRTKPNEKPSAVDLSICTPDLASSHSWYTLSSTFGSDH 282
+ L+N G T T E+ SA+DL+ + L + W L SDH
Sbjct: 156 MVLMNNGQDTFVTP--ERKSAIDLTFVSQSLMETTGWEVLPDYMNSDH 201
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 36.7 bits (81), Expect = 8e-04
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = -1
Query: 162 DVASYRPIALSSVLTKVAEHLVKNRLEWFIE--NNNFIANSQYGFRKSKSTII 10
D +S+RPI L + K E L+ +RL +E +N ++ QYGFR +ST++
Sbjct: 490 DPSSFRPICLLNNAGKTFERLLLDRLNEHLEDSDNPQLSEYQYGFRLGRSTLL 542
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 36.3 bits (80), Expect = 0.001
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = -1
Query: 153 SYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRKSKSTI 13
S RPI L K E ++ RL IE N +++ Q+GFR +ST+
Sbjct: 473 SVRPICLLDGAGKGLERIIVQRLNAHIEEVNGLSDDQFGFRSRRSTV 519
Score = 34.3 bits (75), Expect = 0.004
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Frame = -2
Query: 515 GDFNC-----HHQMFGCGTTDTNGVHLVEILDLQ-NLCLLNTGSPTRRTKPNEKPSAVDL 354
GDFN ++Q+ G T LV Q + LLN GS P + S VDL
Sbjct: 118 GDFNAWSASWNNQLGERGETQKRRGELVLSTFAQIDAILLNDGSTPTYVGPG-RTSVVDL 176
Query: 353 SICTPDLASSHSWYTLSSTFGSDH 282
+ + +A S W LSS SDH
Sbjct: 177 TFASRTVARSFKWEVLSSYMNSDH 200
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 30.7 bits (66), Expect = 0.055
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 156 ASYRPIALSSVLTKVAEHLVKNRLEWFIENNNFIANSQYGFRKS 25
A YRP+ S L KV ++ +++ + NN + Q G RK+
Sbjct: 532 AKYRPLTCLSNLNKVLSSVITQKVKDHCDTNNVMTEEQTGRRKN 575
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,185
Number of Sequences: 2352
Number of extensions: 12782
Number of successful extensions: 60
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -