Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_K17
(732 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23484-4|AAC46768.2| 260|Caenorhabditis elegans Nudix family pr... 191 5e-49
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 51 1e-06
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 51 1e-06
U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family pr... 40 0.002
Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 36 0.022
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 36 0.022
AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical ... 35 0.068
AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical ... 35 0.068
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 34 0.090
AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family ... 32 0.36
Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical pr... 31 0.64
AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical ... 31 0.64
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 29 4.5
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 29 4.5
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 28 5.9
AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical... 28 7.8
>U23484-4|AAC46768.2| 260|Caenorhabditis elegans Nudix family
protein 6 protein.
Length = 260
Score = 191 bits (465), Expect = 5e-49
Identities = 97/181 (53%), Positives = 120/181 (66%), Gaps = 5/181 (2%)
Frame = +1
Query: 169 VHSKCVGF---YPRSNLKRFPVPDDKVDWSTEYKQYNPPNYTFPGLHGKPYADPEIGDPN 339
VH KC Y SN+ R VPD+ V WS E+ YNPP +T P + G +ADPEI +
Sbjct: 4 VHQKCRNIDTVYLGSNIHRLNVPDNLVKWSQEWSGYNPPAHTDPKVDGAVWADPEIDEKT 63
Query: 340 FEPLWNSIDGNISRVSYNGPYQI--VNGFPLNPLGRTGICGRGVLGRWGPNHAADPIISR 513
F+P WN+IDG I+RVSY Y V PLNP+GRTG+ GRG+LGRWGPNHAADPI+SR
Sbjct: 64 FQPSWNAIDGKINRVSYVCQYSFDPVTLRPLNPIGRTGLSGRGLLGRWGPNHAADPIVSR 123
Query: 514 WKRLDNGNMAVGVNNKPILQFIAIKRGDTGEWAIPGGMVDPGEKVSETAIREFKEEALNS 693
DNG+ L+F+A++R D GEWAIPGGMVD GE VS+T REF EEA++
Sbjct: 124 TN--DNGD----------LEFVAVQRHDNGEWAIPGGMVDAGEHVSQTLRREFAEEAMHG 171
Query: 694 L 696
+
Sbjct: 172 I 172
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Frame = +1
Query: 193 YPRSNLKRFPVPDDKVDWSTEYKQYNPPNYTFPG----LHGKPYAD--PEIGDPNFEPLW 354
YP SN+ + V W+ +YNPP Y P + Y D E + +W
Sbjct: 1164 YPESNILKISVNMVSKPWTVLVPRYNPPFYCKPAEDFPSDVQKYVDIATEQNVGELKRIW 1223
Query: 355 NSIDGNISRVSYNGPYQI-VNGFPLNPLGRTGICGRGVLGRWGPN 486
S N S + +++ GFPLNP GRTG+ GRG R+G N
Sbjct: 1224 RSRQANDVTSSNDKCWKLSAAGFPLNPNGRTGMAGRGNHPRFGAN 1268
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 50.8 bits (116), Expect = 1e-06
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Frame = +1
Query: 193 YPRSNLKRFPVPDDKVDWSTEYKQYNPPNYTFPG----LHGKPYAD--PEIGDPNFEPLW 354
YP SN+ + V W+ +YNPP Y P + Y D E + +W
Sbjct: 773 YPESNILKISVNMVSKPWTVLVPRYNPPFYCKPAEDFPSDVQKYVDIATEQNVGELKRIW 832
Query: 355 NSIDGNISRVSYNGPYQI-VNGFPLNPLGRTGICGRGVLGRWGPN 486
S N S + +++ GFPLNP GRTG+ GRG R+G N
Sbjct: 833 RSRQANDVTSSNDKCWKLSAAGFPLNPNGRTGMAGRGNHPRFGAN 877
>U55855-1|AAA98017.1| 188|Caenorhabditis elegans Nudix family
protein 3 protein.
Length = 188
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 589 RGDTGEWAIPGGMVDPGEKVSETAIRE-FKEEALNSLSL 702
R GE PGG +DPGE +ETA+RE F+E +N+ S+
Sbjct: 26 RSHRGEVCFPGGRMDPGETTTETALRETFEEIGVNAESV 64
>Z82053-2|CAB04835.1| 365|Caenorhabditis elegans Hypothetical
protein T26E3.2 protein.
Length = 365
Score = 37.1 bits (82), Expect = 0.013
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 586 KRGDTGEWAIPGGMVDPGEKVSETAIREFKEE 681
K+ G+W +P G V+ GE + E +RE KEE
Sbjct: 97 KKSCRGKWYMPAGRVEAGETIEEAVVREVKEE 128
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical
protein K04H4.1b protein.
Length = 1502
Score = 36.3 bits (80), Expect = 0.022
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +1
Query: 286 FPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQIVNGFPLNPLGRTGICGRGV 465
FPGLHG+P + G+ F N IDG+ +G Y G P P G TG G
Sbjct: 520 FPGLHGEPGMRGQQGEVGF----NGIDGDCGEPGLDG-YPGAPGAPGAP-GETGFGFPGQ 573
Query: 466 LGRWGPN 486
+G GPN
Sbjct: 574 VGYPGPN 580
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical
protein K04H4.1a protein.
Length = 1759
Score = 36.3 bits (80), Expect = 0.022
Identities = 26/67 (38%), Positives = 32/67 (47%)
Frame = +1
Query: 286 FPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQIVNGFPLNPLGRTGICGRGV 465
FPGLHG+P + G+ F N IDG+ +G Y G P P G TG G
Sbjct: 777 FPGLHGEPGMRGQQGEVGF----NGIDGDCGEPGLDG-YPGAPGAPGAP-GETGFGFPGQ 830
Query: 466 LGRWGPN 486
+G GPN
Sbjct: 831 VGYPGPN 837
>AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical
protein Y37H9A.6 protein.
Length = 138
Score = 34.7 bits (76), Expect = 0.068
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +1
Query: 607 WAIPGGMVDPGEKVSETAIREFKEEA 684
W P G VDPGE + AIRE KEEA
Sbjct: 32 WTPPKGHVDPGEDEWQAAIRETKEEA 57
>AC084268-2|AAL16324.1| 150|Caenorhabditis elegans Hypothetical
protein Y92H12BL.5 protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.068
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 595 DTGEWAIPGGMVDPGEKVSETAIREFKEEALNSLSLTDKI 714
D G+W +PGG ++ E E A RE EEA ++ KI
Sbjct: 49 DGGKWVVPGGGIEKDECAEEAAHRELMEEAGVRATILKKI 88
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV)
collagen protein.
Length = 1758
Score = 34.3 bits (75), Expect = 0.090
Identities = 26/67 (38%), Positives = 31/67 (46%)
Frame = +1
Query: 286 FPGLHGKPYADPEIGDPNFEPLWNSIDGNISRVSYNGPYQIVNGFPLNPLGRTGICGRGV 465
FPGLHG+P + G+ F N IDG+ +G Y G P P G TG G
Sbjct: 776 FPGLHGEPGMRGQQGEVGF----NGIDGDCGEPGLDG-YPGAPGAPGAP-GETGFGFPGQ 829
Query: 466 LGRWGPN 486
G GPN
Sbjct: 830 DGYPGPN 836
>AF067946-2|AAC17685.1| 223|Caenorhabditis elegans Nudix family
protein 2 protein.
Length = 223
Score = 32.3 bits (70), Expect = 0.36
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 613 IPGGMVDPGEKVSETAIREFKEE 681
+P G++D GE + AIRE KEE
Sbjct: 108 LPAGLIDAGETAQQAAIRELKEE 130
>Z81066-7|CAB02973.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.64
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 479 PHRPKTPRPQIPVRPRG 429
PHRP+ PRP P PRG
Sbjct: 52 PHRPRPPRPSRPTTPRG 68
>AL022289-6|CAA18377.1| 244|Caenorhabditis elegans Hypothetical
protein F17B5.5 protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.64
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2
Query: 479 PHRPKTPRPQIPVRPRG 429
PHRP+ PRP P PRG
Sbjct: 52 PHRPRPPRPSRPTTPRG 68
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +1
Query: 151 MNSILTVHSKCVGFYPRSNLKRFPVPDDKVDWSTEYKQYNPPNYTFPGLHGKPYADP--E 324
+++I+ S+ VGFYPRS P+ + ST + + ++ G Y P
Sbjct: 2185 IDAIINGGSRSVGFYPRSTFASNPL-TPPLGSSTPTHRPHVTDFRSAVDAGSSYRRPIST 2243
Query: 325 IGDPNFEPLWNSIDGNISRVSYNGP 399
I D E +N+ +S++ N P
Sbjct: 2244 IEDSGMEVTFNTYPPEVSKLQQNTP 2268
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -2
Query: 692 ELRASSLNSLIAVSLTFSPGSTIPPGIAHSP-VSPRFIAINCNIGLLFTPTAIFPLSSLF 516
E + +AV T SPGS++ AHSP SP A + G+ P PL F
Sbjct: 36 ERMVGKFDGKVAVEKTSSPGSSVGTSNAHSPGTSPSTSASGAS-GIPQPP----PLPYWF 90
Query: 515 QRLIIGSAA*LGPHRP 468
R S +GP P
Sbjct: 91 NRECKSSLMMIGPQPP 106
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -2
Query: 674 LNSLIAVSLTFSPGSTIPPGIAHSPVSPRFIAINCNIGLLFTPTAIFPLSSLFQRLI 504
L S + S+ GS +PPG+A P+ +C LF+ + ++LFQ I
Sbjct: 9 LRSAVRASVQACNGSGLPPGLA--DFKPKLFGFSC--ARLFSKIYVLKATNLFQLFI 61
>AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical
protein Y18D10A.12 protein.
Length = 228
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 479 PHRPKTPRPQIPVRPR 432
PH P+ PRPQ PV+PR
Sbjct: 49 PHSPRPPRPQ-PVQPR 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,622,684
Number of Sequences: 27780
Number of extensions: 387756
Number of successful extensions: 964
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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