Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_K16
         (764 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0710 + 10587969-10588069,10588181-10588262,10588362-105884...    29   4.1  

>03_02_0710 +
           10587969-10588069,10588181-10588262,10588362-10588414,
           10588828-10589315,10589415-10589575,10589699-10589896,
           10590091-10590277,10590355-10590611
          Length = 508

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -3

Query: 717 GSSLLPSHT-KTESFIRSVTTRHIISVL--HISNSWTRHLLLTYLMRRLDVTILGDVPSI 547
           G+  +  H  K E F+R V    + +VL  HI ++    L L    +R  +   G++P  
Sbjct: 43  GAQYMQRHLPKLEPFLRRVVQEEVQNVLIRHIDSAHRLPLQLKTSSKRYKLQFQGNLPLT 102

Query: 546 MFTG 535
           +FTG
Sbjct: 103 LFTG 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,848,470
Number of Sequences: 37544
Number of extensions: 345396
Number of successful extensions: 746
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)