Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_K13
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64862-1|AAM69079.2| 593|Caenorhabditis elegans Hypothetical pr... 149 2e-36
Z77655-8|CAB01138.3| 402|Caenorhabditis elegans Hypothetical pr... 126 2e-29
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 33 0.26
U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidan... 32 0.45
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 30 1.4
U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division c... 30 1.4
U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division c... 30 1.4
U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division c... 30 1.4
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 30 1.4
AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14 phosph... 30 1.4
AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14 phosph... 30 1.4
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 30 1.4
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 30 1.4
AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14 phosph... 30 1.4
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 30 1.4
AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice... 30 1.8
AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice... 30 1.8
AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice... 30 1.8
AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice... 30 1.8
AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated... 30 1.8
AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated... 30 1.8
AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated... 30 1.8
AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated... 30 1.8
AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated... 30 1.8
Z81092-1|CAB03144.1| 143|Caenorhabditis elegans Hypothetical pr... 29 4.2
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 4.2
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 4.2
Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical pr... 28 7.4
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 28 7.4
AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger p... 28 7.4
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 27 9.8
AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical ... 27 9.8
>U64862-1|AAM69079.2| 593|Caenorhabditis elegans Hypothetical
protein ZC8.6 protein.
Length = 593
Score = 149 bits (360), Expect = 2e-36
Identities = 69/113 (61%), Positives = 80/113 (70%)
Frame = +2
Query: 362 QAETAIDNGIFPERIYQGSSGSYFVKNAGGKIIGVFKPKDEEPYGRLNPKWMKWMHKLCC 541
+A AI NG +P+RI QGSSGSYFVKN +II VFKPK+EEPYG LNPKW+KW+H++
Sbjct: 116 EACRAIHNGHYPQRIAQGSSGSYFVKNMHDEIIAVFKPKNEEPYGSLNPKWLKWIHRVFL 175
Query: 542 PCCFGRSCLIPNQGYLSEAGASLVDSKIGXXXXXXXXXXXXXSETFNYLRIXR 700
PCCFGRSCL PNQGYLSE GASLVD K+ + TF Y RI R
Sbjct: 176 PCCFGRSCLPPNQGYLSEVGASLVDEKLKLGIVPPTGVVELAAPTFYYDRIDR 228
>Z77655-8|CAB01138.3| 402|Caenorhabditis elegans Hypothetical
protein C56A3.8a protein.
Length = 402
Score = 126 bits (303), Expect = 2e-29
Identities = 59/119 (49%), Positives = 75/119 (63%)
Frame = +2
Query: 335 DPQFSELVLQAETAIDNGIFPERIYQGSSGSYFVKNAGGKIIGVFKPKDEEPYGRLNPKW 514
D +F + +A+ AI+ GI P I +GSSGSYFV G+I+GVFKPKDEEP+ LNPKW
Sbjct: 33 DDEFQLVFQKAQEAINKGIQPSLIPEGSSGSYFVYGLEGEIVGVFKPKDEEPFASLNPKW 92
Query: 515 MKWMHKLCCPCCFGRSCLIPNQGYLSEAGASLVDSKIGXXXXXXXXXXXXXSETFNYLR 691
K+ ++ C CCFGR+CLIPN GYLSEA AS+V + S +F Y R
Sbjct: 93 PKFFQRMLCFCCFGRACLIPNTGYLSEAAASIVSEMLQLDVVPTTRIVKLASPSFFYSR 151
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRR-PLITASSRRGYTKDP 419
S+ Q P ASW++RRR P +TAS+ K+P
Sbjct: 145 SVARQPPPQQASWFFRRRSLPSLTASAPGNTLKEP 179
>U00037-6|AAA50658.1| 419|Caenorhabditis elegans Osmotic avoidance
abnormal protein10 protein.
Length = 419
Score = 31.9 bits (69), Expect = 0.45
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = -2
Query: 384 LSMAVSACSTSSLNWGSSGK*LKDTSKSPRPPSSGCDSRFTPGESRLPSNSTSGTKQISS 205
+S A SACS + ++ +SG +S+ P E LPS T+GT + +
Sbjct: 1 MSKATSACSQKKTSLLDPSPKKSSVIETTTKKTSGIESKLLPNE--LPSTGTTGTSGVKN 58
Query: 204 ELLDNETTPS 175
+T+P+
Sbjct: 59 GASSPKTSPA 68
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division
cycle related protein14, isoform d protein.
Length = 695
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division
cycle related protein14, isoform e protein.
Length = 707
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division
cycle related protein14, isoform a protein.
Length = 693
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14
phosphatase isoform E protein.
Length = 707
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14
phosphatase isoform D protein.
Length = 695
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14
phosphatase isoform A protein.
Length = 693
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +3
Query: 318 SITSQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKSPT 494
S T QMT S ++ R R P+I S+ G + + R KT + A+ +R + T
Sbjct: 477 SSTPQMTVPSQAYLNRNREPIIVTPSKNGTSSGTSSRQL-KTTPNGNVAYRTRNSSGNT 534
>AF427477-1|AAL65145.1| 527|Caenorhabditis elegans UNC-62 splice
variant 1b-7b protein.
Length = 527
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = -2
Query: 513 HLGFKRP*GSSSFGLKTPMIFPPAFFTKYDPLDPWYILSGKMPLSMAVSACSTSSLNWGS 334
HLG S G TPM +PP + + PL + G P+ + A S + + +
Sbjct: 195 HLGHSS--SPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSSMAYSMAGMAAAA 252
Query: 333 SGK*LKDTSKSPRPPSSGCDSRFTPGESR-LPSNSTSGTKQISSELLDNETTPSSG 169
+ P ++G T G S+ L + S SS L ++TP SG
Sbjct: 253 ASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTPLSG 308
>AF427476-1|AAL65144.1| 523|Caenorhabditis elegans UNC-62 splice
variant 1b-7a protein.
Length = 523
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = -2
Query: 513 HLGFKRP*GSSSFGLKTPMIFPPAFFTKYDPLDPWYILSGKMPLSMAVSACSTSSLNWGS 334
HLG S G TPM +PP + + PL + G P+ + A S + + +
Sbjct: 195 HLGHSS--SPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSSMAYSMAGMAAAA 252
Query: 333 SGK*LKDTSKSPRPPSSGCDSRFTPGESR-LPSNSTSGTKQISSELLDNETTPSSG 169
+ P ++G T G S+ L + S SS L ++TP SG
Sbjct: 253 ASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTPLSG 308
>AF427475-1|AAL65143.1| 564|Caenorhabditis elegans UNC-62 splice
variant 1a-7b protein.
Length = 564
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = -2
Query: 513 HLGFKRP*GSSSFGLKTPMIFPPAFFTKYDPLDPWYILSGKMPLSMAVSACSTSSLNWGS 334
HLG S G TPM +PP + + PL + G P+ + A S + + +
Sbjct: 232 HLGHSS--SPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSSMAYSMAGMAAAA 289
Query: 333 SGK*LKDTSKSPRPPSSGCDSRFTPGESR-LPSNSTSGTKQISSELLDNETTPSSG 169
+ P ++G T G S+ L + S SS L ++TP SG
Sbjct: 290 ASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTPLSG 345
>AF427474-1|AAL65142.1| 560|Caenorhabditis elegans UNC-62 splice
variant 1a-7a protein.
Length = 560
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = -2
Query: 513 HLGFKRP*GSSSFGLKTPMIFPPAFFTKYDPLDPWYILSGKMPLSMAVSACSTSSLNWGS 334
HLG S G TPM +PP + + PL + G P+ + A S + + +
Sbjct: 232 HLGHSS--SPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSSMAYSMAGMAAAA 289
Query: 333 SGK*LKDTSKSPRPPSSGCDSRFTPGESR-LPSNSTSGTKQISSELLDNETTPSSG 169
+ P ++G T G S+ L + S SS L ++TP SG
Sbjct: 290 ASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTPLSG 345
>AC006692-5|AAV58860.1| 490|Caenorhabditis elegans Uncoordinated
protein 62, isoform g protein.
Length = 490
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = -2
Query: 513 HLGFKRP*GSSSFGLKTPMIFPPAFFTKYDPLDPWYILSGKMPLSMAVSACSTSSLNWGS 334
HLG S G TPM +PP + + PL + G P+ + A S + + +
Sbjct: 158 HLGHSS--SPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSSMAYSMAGMAAAA 215
Query: 333 SGK*LKDTSKSPRPPSSGCDSRFTPGESR-LPSNSTSGTKQISSELLDNETTPSSG 169
+ P ++G T G S+ L + S SS L ++TP SG
Sbjct: 216 ASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTPLSG 271
>AC006692-4|AAF39975.1| 527|Caenorhabditis elegans Uncoordinated
protein 62, isoform b protein.
Length = 527
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = -2
Query: 513 HLGFKRP*GSSSFGLKTPMIFPPAFFTKYDPLDPWYILSGKMPLSMAVSACSTSSLNWGS 334
HLG S G TPM +PP + + PL + G P+ + A S + + +
Sbjct: 195 HLGHSS--SPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSSMAYSMAGMAAAA 252
Query: 333 SGK*LKDTSKSPRPPSSGCDSRFTPGESR-LPSNSTSGTKQISSELLDNETTPSSG 169
+ P ++G T G S+ L + S SS L ++TP SG
Sbjct: 253 ASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTPLSG 308
>AC006692-3|AAO61420.1| 523|Caenorhabditis elegans Uncoordinated
protein 62, isoform e protein.
Length = 523
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = -2
Query: 513 HLGFKRP*GSSSFGLKTPMIFPPAFFTKYDPLDPWYILSGKMPLSMAVSACSTSSLNWGS 334
HLG S G TPM +PP + + PL + G P+ + A S + + +
Sbjct: 195 HLGHSS--SPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSSMAYSMAGMAAAA 252
Query: 333 SGK*LKDTSKSPRPPSSGCDSRFTPGESR-LPSNSTSGTKQISSELLDNETTPSSG 169
+ P ++G T G S+ L + S SS L ++TP SG
Sbjct: 253 ASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTPLSG 308
>AC006692-2|AAF39974.1| 564|Caenorhabditis elegans Uncoordinated
protein 62, isoform a protein.
Length = 564
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = -2
Query: 513 HLGFKRP*GSSSFGLKTPMIFPPAFFTKYDPLDPWYILSGKMPLSMAVSACSTSSLNWGS 334
HLG S G TPM +PP + + PL + G P+ + A S + + +
Sbjct: 232 HLGHSS--SPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSSMAYSMAGMAAAA 289
Query: 333 SGK*LKDTSKSPRPPSSGCDSRFTPGESR-LPSNSTSGTKQISSELLDNETTPSSG 169
+ P ++G T G S+ L + S SS L ++TP SG
Sbjct: 290 ASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTPLSG 345
>AC006692-1|AAO61421.1| 560|Caenorhabditis elegans Uncoordinated
protein 62, isoform f protein.
Length = 560
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = -2
Query: 513 HLGFKRP*GSSSFGLKTPMIFPPAFFTKYDPLDPWYILSGKMPLSMAVSACSTSSLNWGS 334
HLG S G TPM +PP + + PL + G P+ + A S + + +
Sbjct: 232 HLGHSS--SPSMAGGATPMHYPPPYEPQSVPLPENAGVMGGHPMEGSSMAYSMAGMAAAA 289
Query: 333 SGK*LKDTSKSPRPPSSGCDSRFTPGESR-LPSNSTSGTKQISSELLDNETTPSSG 169
+ P ++G T G S+ L + S SS L ++TP SG
Sbjct: 290 ASSSSSSNQAGDHPLANGGTLHSTAGASQTLLPIAVSSPSTCSSGGLRQDSTPLSG 345
>Z81092-1|CAB03144.1| 143|Caenorhabditis elegans Hypothetical
protein F58D12.1 protein.
Length = 143
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 318 KDTSKSPRPPSSGCDSRFTPGESRLP 241
K + + PRPPSS S PG +R P
Sbjct: 43 KISDRPPRPPSSSASSSPAPGSARKP 68
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 602 HRPRTSTPGSGSDRSGRSNT 543
HR R+ +P G DRSGRS++
Sbjct: 373 HRNRSRSPSDGMDRSGRSSS 392
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3
Query: 602 HRPRTSTPGSGSDRSGRSNT 543
HR R+ +P G DRSGRS++
Sbjct: 373 HRNRSRSPSDGMDRSGRSSS 392
>Z82283-1|CAB05282.1| 354|Caenorhabditis elegans Hypothetical
protein T23G4.1 protein.
Length = 354
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 396 GKMPLSMAVSACSTSSLNWGSSGK*LKDTSKSPR 295
GK PL++ C T L GSS K +S SP+
Sbjct: 21 GKSPLALLAKTCETIGLPEGSSKKNGASSSSSPQ 54
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 327 SQMTPSSASWYYRRRRPLITASSRRGYTKDPAGRTS*KTRAGKSSAFSSRKTKS 488
S+ TP + S Y + TASS R Y+ + R++ T+ KSS +S R TKS
Sbjct: 109 SKSTPRTNSGYSTGKTTK-TASSSRNYSNTSSTRST--TKPSKSS-YSKRSTKS 158
>AY046083-1|AAL02420.1| 354|Caenorhabditis elegans zinc finger
protein TLP-1 protein.
Length = 354
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 396 GKMPLSMAVSACSTSSLNWGSSGK*LKDTSKSPR 295
GK PL++ C T L GSS K +S SP+
Sbjct: 21 GKSPLALLAKTCETIGLPEGSSKKNGASSSSSPQ 54
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +2
Query: 380 DNGIFPERIY---QGSSGSYFVKNAGGKIIGVFKPKDEEPYGRLNPKWMKWMHKL 535
D P+R+ Q ++GSYF G K D E +NPKW W L
Sbjct: 194 DQMTMPQRLLNLIQYAAGSYFFSYVGDK--------DAEVAKEINPKWRSWRETL 240
>AF003390-4|AAB54273.1| 1165|Caenorhabditis elegans Hypothetical
protein R155.3 protein.
Length = 1165
Score = 27.5 bits (58), Expect = 9.8
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = -2
Query: 252 SRLPSNSTSGTKQI----SSELLDNETTPSSGGAVVVFGLSKSRFNRVSSVLMSNV 97
S LPS +++G K I S E T S ++ L KSR RVSSV + +V
Sbjct: 108 SELPSKASNGDKIIDMLNSFEKSIKSLTEDSPSIGTLYELLKSRHLRVSSVALKHV 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,608,411
Number of Sequences: 27780
Number of extensions: 336909
Number of successful extensions: 1212
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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