Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_K13
         (700 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    26   0.30 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    26   0.30 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    26   0.30 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.52 
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    25   0.91 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.8  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   3.7  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   4.9  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 596 PRTSTPGSGSDRSGRSNTGSKACASISSIW 507
           P   T G G   S R  TGS+A A+ ++++
Sbjct: 279 PTEVTIGGGGTTSSRRTTGSRAAATTTTVY 308


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 596 PRTSTPGSGSDRSGRSNTGSKACASISSIW 507
           P   T G G   S R  TGS+A A+ ++++
Sbjct: 279 PTEVTIGGGGTTSSRRTTGSRAAATTTTVY 308


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 596 PRTSTPGSGSDRSGRSNTGSKACASISSIW 507
           P   T G G   S R  TGS+A A+ ++++
Sbjct: 279 PTEVTIGGGGTTSSRRTTGSRAAATTTTVY 308


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 590 TSTPGSGSDRSGRSNTGSKACASISSIWGSND 495
           TSTPGSGS  +  +++G     S +S  G+ D
Sbjct: 233 TSTPGSGSLPASPADSGVSDVESSTSSGGNED 264


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 91  TFNITHEYGRDSVESRFRQTKHNN 162
           T N  + Y RDS+    + TKH+N
Sbjct: 107 TKNCVNPYDRDSLSCWLQMTKHHN 130


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = -2

Query: 294  PPSSGCDSRFTPGESRLPSNSTSGTKQISSELLDNETTPSS 172
            PP+  C +   P + +LP +S      ++    D  T P +
Sbjct: 1269 PPAYSCGTVSVPQQQQLPPSSPQPRLTVNHAYRDAVTVPGN 1309


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 690 RR*LNVSDTNFTTLVLGTTLSPILESTR 607
           RR   V D  F TLV+  T   +LE  R
Sbjct: 29  RRRSLVDDARFETLVVKQTKQSVLEEAR 56


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +2

Query: 266 NRESQPLLGGRGDFEVSFNYFPD 334
           +R S+P+   +GD +V+F+  PD
Sbjct: 13  DRPSEPVYVPKGDNKVAFDIPPD 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,273
Number of Sequences: 438
Number of extensions: 3925
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)