Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_K08
         (364 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029426-1|AAH29426.1|  251|Homo sapiens ABCA5 protein protein.        29   5.9  
AY028897-1|AAK30022.1| 1642|Homo sapiens ATP-binding cassette A5...    29   5.9  
AJ512612-1|CAD54757.1|  925|Homo sapiens ABCA5 transporter protein.    29   5.9  
AJ275973-1|CAB93535.3| 1642|Homo sapiens ATP-binding cassette pr...    29   5.9  

>BC029426-1|AAH29426.1|  251|Homo sapiens ABCA5 protein protein.
          Length = 251

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 8   ITLQHVILFCRRKLSVLSNIIFPLNYLKIRWLQYIHVVH 124
           + L++ ++ CR K S +  I+FPL +L   WL  I ++H
Sbjct: 17  LLLKNYLIKCRTKKSSVQEILFPLFFL--FWLILISMMH 53


>AY028897-1|AAK30022.1| 1642|Homo sapiens ATP-binding cassette A5
           protein.
          Length = 1642

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 8   ITLQHVILFCRRKLSVLSNIIFPLNYLKIRWLQYIHVVH 124
           + L++ ++ CR K S +  I+FPL +L   WL  I ++H
Sbjct: 17  LLLKNYLIKCRTKKSSVQEILFPLFFL--FWLILISMMH 53


>AJ512612-1|CAD54757.1|  925|Homo sapiens ABCA5 transporter protein.
          Length = 925

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 8   ITLQHVILFCRRKLSVLSNIIFPLNYLKIRWLQYIHVVH 124
           + L++ ++ CR K S +  I+FPL +L   WL  I ++H
Sbjct: 17  LLLKNYLIKCRTKKSSVQEILFPLFFL--FWLILISMMH 53


>AJ275973-1|CAB93535.3| 1642|Homo sapiens ATP-binding cassette
           protein protein.
          Length = 1642

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 8   ITLQHVILFCRRKLSVLSNIIFPLNYLKIRWLQYIHVVH 124
           + L++ ++ CR K S +  I+FPL +L   WL  I ++H
Sbjct: 17  LLLKNYLIKCRTKKSSVQEILFPLFFL--FWLILISMMH 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,213,184
Number of Sequences: 237096
Number of extensions: 791926
Number of successful extensions: 5114
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5114
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)