Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_K08
         (364 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   4.5  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   4.5  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    21   5.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   7.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    20   7.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 20  HVILFCRRKLSVLSNII 70
           HV L+ ++ L+VL NI+
Sbjct: 349 HVKLYTKQGLNVLGNIV 365


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 20  HVILFCRRKLSVLSNII 70
           HV L+ ++ L+VL NI+
Sbjct: 349 HVKLYTKQGLNVLGNIV 365


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +2

Query: 2   SIITLQHVILFCRRKLSVLSNIIFPLNYLKIRWL 103
           S+I     +LF  + + + +N+   LN   + WL
Sbjct: 7   SVIASDMAVLFPEKIIGLHNNMCTSLNLSNLFWL 40


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 268 TSRSTYLCNKDDYF 227
           +SR  Y C++ DYF
Sbjct: 111 SSRMEYECSRIDYF 124


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.8
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -2

Query: 285 LLAKKKHQGLPIFVTK 238
           +LAKK+ +G+P ++ K
Sbjct: 249 ILAKKEIKGVPTYLIK 264


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,274
Number of Sequences: 438
Number of extensions: 1816
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)