Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_K04
(865 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 33 0.040
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 33 0.052
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 32 0.091
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 31 0.16
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.21
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 30 0.49
SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyc... 30 0.49
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 30 0.49
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 30 0.49
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 29 0.64
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 29 0.64
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 1.1
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 29 1.1
SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|c... 28 1.5
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.5
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 28 2.0
SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein L5|Sch... 27 4.5
SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein L5|Schizo... 27 4.5
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 7.9
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 26 7.9
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 33.5 bits (73), Expect = 0.040
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 647 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPN 748
P++ LAG+FSG + P+D +KTR+Q N
Sbjct: 18 PMYAHLLAGAFSGILEHSVMYPVDAIKTRMQMLN 51
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 665 LAGSFSGTFSTVLFQPLDLVKTRLQ 739
++G SG ++ L PLD+VKT LQ
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQ 233
Score = 27.1 bits (57), Expect = 3.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 665 LAGSFSGTFSTVLFQPLDLVKTRLQNPNHHVMAA 766
LAG+ + T S P D++K R+Q P+ +A
Sbjct: 118 LAGACAITISDAFMTPFDVIKQRMQLPSRKYKSA 151
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 33.1 bits (72), Expect = 0.052
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 647 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQN 742
P F+AG +G + PLD+VKTRLQ+
Sbjct: 47 PPLSHFIAGGVAGMLGAIATAPLDVVKTRLQS 78
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 32.3 bits (70), Expect = 0.091
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRLQNPNH 751
F++G SGT +T+L QP D+ KT Q H
Sbjct: 250 FVSGGISGTLATLLTQPFDVSKTAKQVHGH 279
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +2
Query: 617 IRMDIVTNYHPVFKAF---LAGSFSGTFSTVLFQPLDLVKTRLQN 742
+ D+ N P K L+ +T+ PLD+VKTRLQ+
Sbjct: 10 VEADLSVNAEPDVKPIAKMLSACVGSVITTLTVTPLDVVKTRLQS 54
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 790 GMITIFANIIRQEQIVGLWRGMVPS 864
G ++ I R E + LWRG+VPS
Sbjct: 84 GPVSGLYQIARHEGVRSLWRGLVPS 108
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 659 AFLAGSFSGTFSTVLFQPLDLVKTRLQNPNHH 754
A +AG+ + T S + P++L +TR+Q H
Sbjct: 139 AAIAGASARTISATIVSPIELFRTRVQAVGGH 170
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 31.5 bits (68), Expect = 0.16
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 650 VFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
VF+ + GS +G + L PLD+ KTRLQ
Sbjct: 214 VFRELITGSLAGAGAGFLTTPLDVAKTRLQ 243
Score = 29.1 bits (62), Expect = 0.85
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = +2
Query: 629 IVTNYH-PVFKAFLAGSFSGT-FSTVLFQPLDLVKTRLQ 739
+++NY+ P FL F G F++V++ P +++KTRLQ
Sbjct: 101 LMSNYNLPETLCFLLAGFVGDLFASVVYVPSEVLKTRLQ 139
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 31.1 bits (67), Expect = 0.21
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 656 KAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
K AG+ G S+ QPLDL+KTR Q
Sbjct: 16 KHLAAGALGGFISSTTLQPLDLLKTRCQ 43
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 665 LAGSFSGTFSTVLFQPLDLVKTRLQNPNH 751
++G SG +T + P D++KTR+Q H
Sbjct: 215 MSGLISGATATAITNPFDMLKTRVQLEPH 243
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +2
Query: 665 LAGSFSGTFSTVLFQPLDLVKTRLQ 739
+AG+ G F T L P D++K+R+Q
Sbjct: 204 IAGTIGGIFGTFLSTPFDVIKSRIQ 228
Score = 29.1 bits (62), Expect = 0.85
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRLQ 739
F AG+ +G + PLD+VKTR+Q
Sbjct: 12 FAAGAVAGISEVLTLYPLDVVKTRMQ 37
>SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 300
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 653 FKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPN 748
F+ F + S ++ PLD++KTR+QN N
Sbjct: 212 FQNFFTSIAGASASLIVSAPLDVIKTRIQNKN 243
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.9 bits (64), Expect = 0.49
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 656 KAFLAGSFSGTFSTVLFQPLDLVKTRLQNPNH 751
K FLAG G ++ QP D VK RLQ+ ++
Sbjct: 19 KDFLAGVSGGVAQVLVGQPFDCVKVRLQSQSN 50
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 29.9 bits (64), Expect = 0.49
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRLQN 742
FL GS +G + QP+D VK+R+Q+
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQS 233
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 29.5 bits (63), Expect = 0.64
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 656 KAFLAGSFSGTFSTVLFQPLDLVKTRL 736
+ FL+GS +GT S PL+L++ RL
Sbjct: 118 RRFLSGSLAGTCSVFFTYPLELIRVRL 144
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 29.5 bits (63), Expect = 0.64
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 665 LAGSFSGTFSTVLFQPLDLVKTRLQ 739
+AG +GT ST++ PLDL K ++Q
Sbjct: 5 IAGLAAGTASTLIMHPLDLAKIQMQ 29
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 611 KCIRMDIVTNYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQN--PNHHVMAAT 769
K + ++ N H V FL G+ +G F+T+ PLD ++T+ + H++ AT
Sbjct: 93 KHLTENLAMNDHAV--NFLCGTSAGIFATLTSYPLDTMRTKFASYAKTPHMLPAT 145
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 647 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
PV+ LAG S + P D++K R+Q
Sbjct: 15 PVWHYTLAGGISSVICRFMIAPFDVIKIRMQ 45
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +2
Query: 638 NYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
N+ P++ ++LAG +G+ + + P+D +K R+Q
Sbjct: 225 NHSPLY-SYLAGGMAGSVAQMFIYPVDTLKFRIQ 257
>SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +2
Query: 665 LAGSFSGT-FSTVLFQPLDLVKTRLQNPNHHVMAATV 772
L GS S + + ++ PLDL+K+ L + NHH + A V
Sbjct: 306 LVGSASKSIYGENIWNPLDLLKSFLDHSNHHGVRAGV 342
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 656 KAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
K +AG +G S+++ PLD+VKTR Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQ 34
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 27.9 bits (59), Expect = 2.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 638 NYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRL 736
N + +A ++GS +G + L P D+VKTR+
Sbjct: 254 NKNLAHEAAISGSIAGGIAAALTTPFDVVKTRI 286
>SPBC11C11.09c |rpl502|rpl5-2, rpl5b|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 294
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 15 VALLSNRSVNCQI*TTQINAKY---YALKNELP 104
V SNR V CQI ++++N Y +A +ELP
Sbjct: 52 VVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELP 84
>SPAC3H5.12c |rpl501|rpl5-1, rpl5|60S ribosomal protein
L5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 294
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 15 VALLSNRSVNCQI*TTQINAKY---YALKNELP 104
V SNR V CQI ++++N Y +A +ELP
Sbjct: 52 VVRFSNRFVTCQIVSSRVNGDYVLAHAHSSELP 84
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 321 FLNIGTVILSL*SNMLQC 374
FLNIGT++++ N+L+C
Sbjct: 206 FLNIGTIVVTFQLNVLRC 223
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 629 IVTNYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
I + P F +G+F G S +L P+D K+ +Q
Sbjct: 207 IANDVKPHFAYAFSGAFCGALSWILVFPVDTAKSIVQ 243
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,604,477
Number of Sequences: 5004
Number of extensions: 75801
Number of successful extensions: 212
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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