Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_K04
(865 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78542-7|CAB01750.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.20
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 33 0.35
AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling pr... 32 0.46
U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical p... 32 0.61
Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical pr... 31 1.4
X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein... 31 1.4
AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholin... 30 1.9
CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical... 29 3.2
U58750-4|AAB00644.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z46787-1|CAA86739.2| 360|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81094-3|CAB03151.1| 477|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z70310-10|CAA94371.2| 341|Caenorhabditis elegans Hypothetical p... 28 7.5
X76114-1|CAA53720.1| 290|Caenorhabditis elegans Oxoglutarate/ma... 28 7.5
U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL023841-13|CAA19513.2| 341|Caenorhabditis elegans Hypothetical... 28 7.5
>Z78542-7|CAB01750.1| 300|Caenorhabditis elegans Hypothetical
protein F20D1.9 protein.
Length = 300
Score = 33.5 bits (73), Expect = 0.20
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 653 FKAFLAGSFSGTFSTVLFQPLDLVKTRLQNPN 748
+ +FLAG SG S+ PLD++KTR+Q N
Sbjct: 203 YGSFLAGLTSGAASSFCVTPLDVIKTRMQTIN 234
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 32.7 bits (71), Expect = 0.35
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRLQN 742
FL GS +G P+DLVKTR+QN
Sbjct: 373 FLLGSVAGACGATAVYPIDLVKTRMQN 399
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 647 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
P++ +AG G V PL++VK RLQ
Sbjct: 467 PLYGEIIAGGTGGMCQVVFTNPLEIVKIRLQ 497
>AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling
protein (mitochondrialsubstrate carrier) protein 4
protein.
Length = 324
Score = 32.3 bits (70), Expect = 0.46
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 647 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
P++K+ L G+FSG + P DLVK ++Q
Sbjct: 118 PLWKSMLCGAFSGLIAQFAASPTDLVKVQMQ 148
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +1
Query: 790 GMITIFANIIRQEQIVGLWRGMVPS 864
GM+ + +IIR+E + LW G+ P+
Sbjct: 62 GMVQVTYDIIRREGAMALWTGVAPA 86
>U80836-10|AAB37890.2| 306|Caenorhabditis elegans Hypothetical
protein B0432.4 protein.
Length = 306
Score = 31.9 bits (69), Expect = 0.61
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 650 VFKAFLAGSFSGTFSTVLFQPLDLVKTRLQN 742
+F FLA SG +T+ P+D+ KTR+Q+
Sbjct: 205 IFCHFLASMISGLATTIASMPVDIAKTRIQS 235
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRLQ 739
F G +G +T++ QPLDLVK R+Q
Sbjct: 13 FAFGGTAGMGATLVVQPLDLVKNRMQ 38
>Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical
protein T09F3.2 protein.
Length = 384
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRLQN 742
F+ G+ GT T + PL++VKTR+Q+
Sbjct: 11 FIGGAVGGTTGTAITCPLEVVKTRMQS 37
>X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein
(c2) protein.
Length = 384
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRLQN 742
F+ G+ GT T + PL++VKTR+Q+
Sbjct: 11 FIGGAVGGTTGTAITCPLEVVKTRMQS 37
>AC084197-42|AAU87806.2| 544|Caenorhabditis elegans Acetylcholine
receptor protein 25 protein.
Length = 544
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = -2
Query: 639 LVTMSILMHFQFYLDLPKILRQVIFHYLSACRGQRAPLYLSPIHSKALPKIATLFFKIC 463
L+TM L+ F F D + + I LS C Q LSP S+A+P ++ FF +C
Sbjct: 245 LITMLTLVGFTFPPDAGEKMSLQITIMLSICIFQNYVAELSPPTSEAVPFLSA-FFAVC 302
>CU457741-10|CAM36351.1| 313|Caenorhabditis elegans Hypothetical
protein C42C1.10 protein.
Length = 313
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRL--QNPNHHVMAATVTA 778
F G+ SG + PLD+++TRL Q H V T+ A
Sbjct: 123 FACGALSGCLAMTAAMPLDVIRTRLVAQKAGHAVYTGTMHA 163
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 659 AFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
A +G+ +GT + + PLD+V+ RLQ
Sbjct: 215 ALFSGAMAGTVAKTVLYPLDMVRHRLQ 241
>U58750-4|AAB00644.1| 309|Caenorhabditis elegans Hypothetical
protein F55G1.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +2
Query: 665 LAGSFSGTFSTVLFQPLDLVKTRLQN 742
L G SG P+DLVKTRLQN
Sbjct: 25 LNGGISGIVGVSCVFPMDLVKTRLQN 50
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +2
Query: 659 AFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
+F++G +G +++ PLD+VKTR+Q
Sbjct: 219 SFVSGLTAGATASLSVTPLDVVKTRIQ 245
>Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical
protein R11.1 protein.
Length = 289
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 668 AGSFSGTFSTVLFQPLDLVKTRLQ 739
AG +G L PLD+VKTRLQ
Sbjct: 13 AGGSAGLVEVCLMYPLDVVKTRLQ 36
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 647 PVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
PV +F AG FSG ++ P ++VK RLQ
Sbjct: 97 PVTMSF-AGLFSGLTEAIVICPFEVVKVRLQ 126
>Z68882-2|CAA93110.1| 306|Caenorhabditis elegans Hypothetical
protein C47E12.2 protein.
Length = 306
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 656 KAFLAGSFSGTFSTVLFQPLDLVKTRLQ-NPNHH 754
+ ++G +G S + PLD ++TRL + NHH
Sbjct: 128 RTLVSGGLAGCSSLCIVYPLDFIRTRLSADINHH 161
>Z46787-1|CAA86739.2| 360|Caenorhabditis elegans Hypothetical
protein C16C10.1 protein.
Length = 360
Score = 28.7 bits (61), Expect = 5.7
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +2
Query: 638 NYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
+++P +F++G+ +G +++ P D++KT Q
Sbjct: 264 DHNPFVVSFVSGAAAGVVASIFTHPFDVIKTNCQ 297
>Z81094-3|CAB03151.1| 477|Caenorhabditis elegans Hypothetical
protein F58G11.4 protein.
Length = 477
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 259 LYVGKVNTLSLIFVVLNSLTYSSQASWPKFSSNLKI 152
L +GKVNT+SLI ++ LT WP +N+ +
Sbjct: 315 LNIGKVNTISLIIFIIYVLT---TYQWPYIPTNVVV 347
>Z78542-9|CAB01742.2| 405|Caenorhabditis elegans Hypothetical
protein F20D1.8 protein.
Length = 405
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 695 TVLFQPLDLVKTRLQNPNHHVMAATVTAEFNP 790
TV + D+++ R NP +M AT+ F+P
Sbjct: 77 TVSYSACDVIRQRSSNPKGIMMTATIIISFHP 108
>Z70310-10|CAA94371.2| 341|Caenorhabditis elegans Hypothetical
protein Y43C5B.3 protein.
Length = 341
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 635 TNYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
TN +F +A + G STV P++L + RLQ
Sbjct: 245 TNRSLLFDQAVAATLGGVISTVATNPMELFRVRLQ 279
>X76114-1|CAA53720.1| 290|Caenorhabditis elegans
Oxoglutarate/malate carrier protein protein.
Length = 290
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRLQN 742
F + + + +TV+ QPLD++KTR+ N
Sbjct: 203 FASSISAASVATVMTQPLDVMKTRMMN 229
>U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical
protein K11G12.5 protein.
Length = 290
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 662 FLAGSFSGTFSTVLFQPLDLVKTRLQN 742
F + + + +TV+ QPLD++KTR+ N
Sbjct: 203 FASSISAASVATVMTQPLDVMKTRMMN 229
>AL023841-13|CAA19513.2| 341|Caenorhabditis elegans Hypothetical
protein Y43C5B.3 protein.
Length = 341
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 635 TNYHPVFKAFLAGSFSGTFSTVLFQPLDLVKTRLQ 739
TN +F +A + G STV P++L + RLQ
Sbjct: 245 TNRSLLFDQAVAATLGGVISTVATNPMELFRVRLQ 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,820,327
Number of Sequences: 27780
Number of extensions: 419050
Number of successful extensions: 1082
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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