Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_K03
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF038618-8|AAB92071.1| 276|Caenorhabditis elegans Iron-sulfur p... 169 2e-42
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical... 29 4.0
Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical ... 28 7.1
AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical ... 28 7.1
AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical ... 28 9.3
>AF038618-8|AAB92071.1| 276|Caenorhabditis elegans Iron-sulfur
protein protein 1 protein.
Length = 276
Score = 169 bits (411), Expect = 2e-42
Identities = 87/177 (49%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
Frame = +2
Query: 245 GSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAYRRKETQDPTSKANETIDERQSF-TY 421
G + GL VK G V ++ R AHTD+++PD S YRR T++ A +T D+R++ T
Sbjct: 59 GGVFTNGLAVK-GINVTSR-RLAHTDVTFPDMSNYRRDSTKNTQVPARDTEDQRRALPTA 116
Query: 422 LIXXXXXXXXXXXXXXXXTHFVSSMSAAADVLALAKIEIKLAEIPEGKSVTFKWRGKPLF 601
L VS + AAD ALA IEI +A+IPEGK+ TF+WRGKP+F
Sbjct: 117 LYYGAGGVLSLWAGKEVVQTLVSYKAMAADQRALASIEINMADIPEGKTKTFEWRGKPVF 176
Query: 602 IRHRTADEISTEKAVPVDTLRDPQHDDQRTQNPKWLVVIGVCTHLGCVPVXNAGESG 772
++HRT EI+ EKAVPV LR PQHDD+R Q +W VVIGVCTHLGCVP+ +AG+ G
Sbjct: 177 VKHRTKAEIAKEKAVPVADLRHPQHDDERVQKDEWSVVIGVCTHLGCVPIADAGDYG 233
Score = 46.8 bits (106), Expect = 2e-05
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1
Query: 769 GGYYCPCHGSHYXASGRI 822
GGYYCPCHGSHY ASGRI
Sbjct: 233 GGYYCPCHGSHYDASGRI 250
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Frame = -2
Query: 808 HXSGSRGRDS--SNPRFTSIGYRHASQVGTYADHDQPLGVLGTLIVVLRVTERVDRHSLL 635
H S + GR+S S+PR SIG AS G D +Q + + + + R D
Sbjct: 19 HTSSTLGRESLPSHPRIPSIGPIAASSSGNTIDKNQNISQSANFVALFQYDARTDDDLSF 78
Query: 634 GRDFVCCPVTDKQ---WFS 587
+D + + D Q WF+
Sbjct: 79 KKDDILEILNDTQGDWWFA 97
>Z81592-2|CAB04726.1| 407|Caenorhabditis elegans Hypothetical
protein T16G1.2 protein.
Length = 407
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +2
Query: 50 KNNYLPIIYRNKMNSVVRAGHLAPYFKSSTQVVANSLKPLVVVPTP--SEKTVVLPLPKT 223
+N+ P+ + +V G AP + Q+ PLV P P + T +P
Sbjct: 173 ENSIQPVRPKTFFQTVTANGSNAPP-NQNAQLPLQPQPPLVFTPQPPIAPPTFTMPSLVP 231
Query: 224 STVETLHGSLPIQGL 268
T++ L SLP QG+
Sbjct: 232 QTIQQLPSSLPQQGI 246
>AL032646-10|CAA21681.1| 725|Caenorhabditis elegans Hypothetical
protein Y54E2A.11a protein.
Length = 725
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 194 KTVVLPLPKTSTVETLHGSLPIQGLKVKAGTRVPAQVRFAHTDISYPDFSAY 349
+TV P S + T+H QG+ + G RFAHT++ Y DFS +
Sbjct: 207 ETVFTWSPHGSYLSTIHK----QGIILWGGKDYARAHRFAHTNVQYIDFSPW 254
>Z84574-8|CAE54891.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 601 YPSQDSRRNLDREGCACRHAP*PSARRSTYP 693
YPS+++ L+ +GC C HA P A+ P
Sbjct: 685 YPSRNAPHQLE-DGCCCAHARAPRAKSIAVP 714
>Z84574-7|CAB06544.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 601 YPSQDSRRNLDREGCACRHAP*PSARRSTYP 693
YPS+++ L+ +GC C HA P A+ P
Sbjct: 692 YPSRNAPHQLE-DGCCCAHARAPRAKSIAVP 721
>AL022593-4|CAE54889.1| 921|Caenorhabditis elegans Hypothetical
protein F33E2.2b protein.
Length = 921
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 601 YPSQDSRRNLDREGCACRHAP*PSARRSTYP 693
YPS+++ L+ +GC C HA P A+ P
Sbjct: 685 YPSRNAPHQLE-DGCCCAHARAPRAKSIAVP 714
>AL022593-3|CAA18635.3| 928|Caenorhabditis elegans Hypothetical
protein F33E2.2a protein.
Length = 928
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 601 YPSQDSRRNLDREGCACRHAP*PSARRSTYP 693
YPS+++ L+ +GC C HA P A+ P
Sbjct: 692 YPSRNAPHQLE-DGCCCAHARAPRAKSIAVP 721
>AL021386-3|CAA16167.1| 330|Caenorhabditis elegans Hypothetical
protein F57E7.3 protein.
Length = 330
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -2
Query: 703 LGVLGTLIVVLRVTERVDRHSLLGRDFVCCP--VTDKQWF 590
LG+ GTL ++ R T+ + H + F C P + DK F
Sbjct: 147 LGLTGTLAILFRTTDSRESHLKVLEKFPCLPKDIIDKPGF 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,850,974
Number of Sequences: 27780
Number of extensions: 399069
Number of successful extensions: 1226
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1225
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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