Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_J24
         (756 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 1...   149   1e-35
AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens ...   149   1e-35
BC022550-1|AAH22550.1|   47|Homo sapiens C16orf69 protein protein.     49   2e-05

>BC036683-1|AAH36683.1|  142|Homo sapiens transmembrane protein 188
           protein.
          Length = 142

 Score =  149 bits (361), Expect = 1e-35
 Identities = 67/106 (63%), Positives = 81/106 (76%)
 Frame = +1

Query: 439 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 618
           DLKAFERRLTE I CLQPAT RWR+LL +VSVCTA  A++WL+DP T  VS   SLWNHP
Sbjct: 26  DLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHP 85

Query: 619 FFAVTSTLLVLLFMIGVHXKVVAPXIITARTRSILNDFXMSCDDTG 756
           FF ++   L+ LF  G+H +VVAP II AR R++L ++ MSCDDTG
Sbjct: 86  FFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTG 131


>AK095420-1|BAC04545.1|  125|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38101 fis, clone D3OST1000270. ).
          Length = 125

 Score =  149 bits (361), Expect = 1e-35
 Identities = 67/106 (63%), Positives = 81/106 (76%)
 Frame = +1

Query: 439 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 618
           DLKAFERRLTE I CLQPAT RWR+LL +VSVCTA  A++WL+DP T  VS   SLWNHP
Sbjct: 9   DLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHP 68

Query: 619 FFAVTSTLLVLLFMIGVHXKVVAPXIITARTRSILNDFXMSCDDTG 756
           FF ++   L+ LF  G+H +VVAP II AR R++L ++ MSCDDTG
Sbjct: 69  FFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTG 114


>BC022550-1|AAH22550.1|   47|Homo sapiens C16orf69 protein protein.
          Length = 47

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 24/31 (77%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
 Frame = +1

Query: 439 DLKAFERRLTEVIACLQPATMRWR-ILLTIV 528
           DLKAFERRLTE I CLQPAT RWR +LL I+
Sbjct: 9   DLKAFERRLTEYIHCLQPATGRWRSVLLHII 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,002,684
Number of Sequences: 237096
Number of extensions: 1695160
Number of successful extensions: 6732
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6732
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)