Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_J24
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1832|AAF50148.1|  127|Drosophila melanogaster CG8009-PA...   148   7e-36
AY069435-1|AAL39580.1|  131|Drosophila melanogaster LD14173p pro...   142   5e-34
AE014296-1831|AAN11906.1|  131|Drosophila melanogaster CG8009-PB...   142   5e-34
AE014298-3223|EAL24566.1|  123|Drosophila melanogaster CG41106-P...    64   3e-10

>AE014296-1832|AAF50148.1|  127|Drosophila melanogaster CG8009-PA,
           isoform A protein.
          Length = 127

 Score =  148 bits (359), Expect = 7e-36
 Identities = 65/106 (61%), Positives = 85/106 (80%)
 Frame = +1

Query: 439 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 618
           DLKAFERRLTEV++  +P+T RWRI+L+ +S+CTAI+A++WL DP T VV LT+SLW HP
Sbjct: 8   DLKAFERRLTEVVSSYRPSTFRWRIVLSAMSMCTAISAWYWLRDPRTTVVPLTESLWIHP 67

Query: 619 FFAVTSTLLVLLFMIGVHXKVVAPXIITARTRSILNDFXMSCDDTG 756
            F V +  LV+LF++G+   V+AP IIT+RTR +L DF MSCDDTG
Sbjct: 68  VFTVATLTLVVLFILGIQKLVIAPQIITSRTRMVLGDFNMSCDDTG 113


>AY069435-1|AAL39580.1|  131|Drosophila melanogaster LD14173p
           protein.
          Length = 131

 Score =  142 bits (344), Expect = 5e-34
 Identities = 66/110 (60%), Positives = 84/110 (76%), Gaps = 4/110 (3%)
 Frame = +1

Query: 439 DLKAFERRLTEVIACLQPATMRWRILLTIV----SVCTAIAAYHWLMDPLTPVVSLTQSL 606
           DLKAFERRLTEV++  +P+T RWR LL +V    S+CTAI+A++WL DP T VV LT+SL
Sbjct: 8   DLKAFERRLTEVVSSYRPSTFRWRKLLAVVLSAMSMCTAISAWYWLRDPRTTVVPLTESL 67

Query: 607 WNHPFFAVTSTLLVLLFMIGVHXKVVAPXIITARTRSILNDFXMSCDDTG 756
           W HP F V +  LV+LF++G+   V+AP IIT+RTR +L DF MSCDDTG
Sbjct: 68  WIHPVFTVATLTLVVLFILGIQKLVIAPQIITSRTRMVLGDFNMSCDDTG 117


>AE014296-1831|AAN11906.1|  131|Drosophila melanogaster CG8009-PB,
           isoform B protein.
          Length = 131

 Score =  142 bits (344), Expect = 5e-34
 Identities = 66/110 (60%), Positives = 84/110 (76%), Gaps = 4/110 (3%)
 Frame = +1

Query: 439 DLKAFERRLTEVIACLQPATMRWRILLTIV----SVCTAIAAYHWLMDPLTPVVSLTQSL 606
           DLKAFERRLTEV++  +P+T RWR LL +V    S+CTAI+A++WL DP T VV LT+SL
Sbjct: 8   DLKAFERRLTEVVSSYRPSTFRWRKLLAVVLSAMSMCTAISAWYWLRDPRTTVVPLTESL 67

Query: 607 WNHPFFAVTSTLLVLLFMIGVHXKVVAPXIITARTRSILNDFXMSCDDTG 756
           W HP F V +  LV+LF++G+   V+AP IIT+RTR +L DF MSCDDTG
Sbjct: 68  WIHPVFTVATLTLVVLFILGIQKLVIAPQIITSRTRMVLGDFNMSCDDTG 117


>AE014298-3223|EAL24566.1|  123|Drosophila melanogaster CG41106-PA
           protein.
          Length = 123

 Score = 63.7 bits (148), Expect = 3e-10
 Identities = 34/106 (32%), Positives = 55/106 (51%)
 Frame = +1

Query: 439 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 618
           DL AFERRL EV+   + +++RWR +L  +  C+AI+A HW+ D       + Q L +  
Sbjct: 8   DLLAFERRLAEVVNTEKRSSLRWRFVLGAIFACSAISACHWVRDAKESESVVFQILSSQS 67

Query: 619 FFAVTSTLLVLLFMIGVHXKVVAPXIITARTRSILNDFXMSCDDTG 756
            FA +   + LL   G +        I   T+ +L+ F ++ D+ G
Sbjct: 68  AFAFSLATICLLIFYGFNHATKQDPSILRDTQEMLSPFRLNIDNQG 113


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,366,991
Number of Sequences: 53049
Number of extensions: 534672
Number of successful extensions: 1131
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)