Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_J19
(771 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 56 4e-08
02_02_0119 + 6978697-6979045,6979519-6979581,6979757-6979866,697... 48 8e-06
02_05_1263 + 35316083-35316185,35317167-35317220,35317665-353179... 47 2e-05
10_08_0493 + 18299885-18299892,18300201-18300837,18301254-183016... 42 7e-04
09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908... 40 0.003
08_01_0673 - 5805218-5805349,5805936-5806026,5806416-5806471,580... 38 0.009
01_01_0956 + 7505206-7505322,7505860-7506723,7506841-7507260,750... 38 0.009
10_08_0962 + 21880919-21880983,21881100-21881487,21881807-218819... 37 0.020
03_03_0131 - 14706123-14706171,14706364-14706422,14706504-147067... 37 0.020
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 35 0.083
10_08_0511 + 18435745-18436499,18436624-18436742,18436788-184373... 34 0.11
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 33 0.25
02_01_0703 + 5251901-5251950,5252783-5253554 31 0.77
10_08_0948 + 21754985-21755290,21756042-21756297,21756845-217569... 31 1.3
02_01_0198 + 1334563-1334994,1335872-1335919,1336096-1336351,133... 30 1.8
01_06_1157 - 34980585-34980774,34981579-34981742 29 4.1
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 28 7.2
04_04_1069 - 30554565-30555021,30556833-30557026,30557182-30557496 28 7.2
03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312... 28 9.5
01_06_0660 + 30969879-30970218,30970346-30970514,30971373-309716... 28 9.5
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 55.6 bits (128), Expect = 4e-08
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Frame = +1
Query: 385 IHVPKSIVPALIGRNGSNIKDLQKKSGAQIHFKKFTDQDYDVCV----VRGRADTTQLAE 552
I+VP + V LIG++G I++LQ SGA+I K + D + + G ++ AE
Sbjct: 156 INVPNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTRSVELVGTLESIDKAE 215
Query: 553 TLIHDFIKQ-----QPTIMTES------------ITVPSWSCGRIIGSGGENVNDISHRS 681
LI + I + P ++ + VP G IIG GGE + + RS
Sbjct: 216 RLIKNVIAEADAGGSPALIARGFGSGQSGSEQFEMLVPDNKVGLIIGKGGETIKTLQTRS 275
Query: 682 GARVKV--ESPKSTDKVAEHLXTFRGTKEQIE 771
GAR+++ + P + E G K+QIE
Sbjct: 276 GARIQLIPQHPPEGVTLTERTVRITGNKKQIE 307
Score = 31.9 bits (69), Expect = 0.58
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 382 EIHVPKSIVPALIGRNGSNIKDLQKKSGAQI 474
E+ VP + V +IG+ G IK LQ +SGA+I
Sbjct: 249 EMLVPDNKVGLIIGKGGETIKTLQTRSGARI 279
>02_02_0119 +
6978697-6979045,6979519-6979581,6979757-6979866,
6979969-6980154,6980266-6980361,6980493-6980564,
6980798-6980909,6982448-6982534,6982680-6983872
Length = 755
Score = 48.0 bits (109), Expect = 8e-06
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 24/153 (15%)
Frame = +1
Query: 385 IHVPKSIVPALIGRNGSNIKDLQKKSGAQIHFKKFTD----QDYDVCVVRGRADTTQLAE 552
I +P V +IG++G IK+LQ +SGA+I + D + G D AE
Sbjct: 168 IEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRAE 227
Query: 553 TLIHDFIKQ-----------------QPTIMTESITVPSWSCGRIIGSGGENVNDISHRS 681
LI++ + + QP + + + G +IG GGE + + +S
Sbjct: 228 QLINEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQAKS 287
Query: 682 GARVKV---ESPKSTDKVAEHLXTFRGTKEQIE 771
GAR++V P D E GT+EQIE
Sbjct: 288 GARIQVVPLHLPPG-DPATERTVYIDGTQEQIE 319
Score = 31.9 bits (69), Expect = 0.58
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +1
Query: 595 TESITVPSWSCGRIIGSGGENVNDISHRSGARVKV 699
+++I +P+ G IIG GE + ++ +SGA+++V
Sbjct: 165 SKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQV 199
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 382 EIHVPKSIVPALIGRNGSNIKDLQKKSGAQI 474
++ + + V +IG+ G IK +Q KSGA+I
Sbjct: 261 QMKIANNKVGLVIGKGGETIKSMQAKSGARI 291
>02_05_1263 +
35316083-35316185,35317167-35317220,35317665-35317903,
35317989-35318089,35318390-35318583,35318885-35319003,
35319624-35319749,35320081-35320142,35320265-35320348,
35320580-35320664
Length = 388
Score = 46.8 bits (106), Expect = 2e-05
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 11/126 (8%)
Frame = +1
Query: 391 VPKSIVPALIGRNGSNIKDLQKKSGAQIHFKK----FTDQDYDVCVVRGRADTTQLAETL 558
V + +IG+ GS I + Q +SGA+I + F + + +V G D A L
Sbjct: 65 VSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIKAMEL 124
Query: 559 IHDFIKQQPTIMTES-------ITVPSWSCGRIIGSGGENVNDISHRSGARVKVESPKST 717
I + + + E+ + VP+ SCG IIG GG + S A +K+ SP+
Sbjct: 125 ILEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKI-SPQDN 183
Query: 718 DKVAEH 735
+ V H
Sbjct: 184 NFVGLH 189
Score = 33.1 bits (72), Expect = 0.25
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 628 GRIIGSGGENVNDISHRSGARVKV-ESPKSTDKVAEHLXTFRGTKEQIE 771
G ++G G N+ +I SGAR+K+ + +E T GT E I+
Sbjct: 297 GAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSERKVTITGTSEAIQ 345
>10_08_0493 +
18299885-18299892,18300201-18300837,18301254-18301676,
18301769-18302014,18302124-18302789,18303228-18303283,
18303367-18303460,18303559-18303738
Length = 769
Score = 41.5 bits (93), Expect = 7e-04
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Frame = +1
Query: 376 TIEIHVPKSIVPALIGRNGSNIKDLQKKSGAQIHFKKF--TDQDYDVCVVRGR------A 531
+I+I + +IG++G N++ +++++GA + K+ + + VV +
Sbjct: 303 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPV 362
Query: 532 DTTQLAETLIHDFIKQ--QPTIMTESITVPSWSCGRIIGSGGENVNDISHRSGARVKVES 705
T A L+H + + +T + VPS G IIG GG+ + ++ R+GA ++V S
Sbjct: 363 SPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYS 422
Query: 706 PKSTDK 723
K
Sbjct: 423 KADKPK 428
Score = 31.9 bits (69), Expect = 0.58
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 610 VPSWSCGRIIGSGGENVNDISHRSGARVKVES--PKSTDKVAE 732
+P+ +IG+GG N+ +I SGARVK+ P S++ + E
Sbjct: 689 IPNSYLESVIGAGGVNLAEIRQISGARVKLHEAHPGSSESIVE 731
>09_04_0618 +
18988614-18989102,18989913-18990314,18990555-18990806,
18991564-18991941,18992350-18992426,18992700-18992808,
18993424-18993574,18993810-18993903,18997072-18997474,
18997590-18997742,18998115-18998474
Length = 955
Score = 39.5 bits (88), Expect = 0.003
Identities = 28/121 (23%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Frame = +1
Query: 403 IVPALIGRNGSNIKDLQKKSGAQIHF-KKFTDQDYDVCVVRGRADTTQL------AETLI 561
+V ++IG+ GS I+ LQ ++GA I + +D + V V+ ++ + A +
Sbjct: 254 MVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRV 313
Query: 562 HDFIKQ----QPTIMTESITVPSWSCGRIIGSGGENVNDISHRSGARVKVESPKSTDKVA 729
H I + + + +T + VPS G ++G GG + ++ +GA +++ + + A
Sbjct: 314 HSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCA 373
Query: 730 E 732
+
Sbjct: 374 Q 374
>08_01_0673 -
5805218-5805349,5805936-5806026,5806416-5806471,
5806571-5806852,5806924-5807057,5807088-5807163,
5807247-5807747,5808454-5809037,5809579-5809597
Length = 624
Score = 37.9 bits (84), Expect = 0.009
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Frame = +1
Query: 379 IEIHVPKSIVPALIGRNGSNIKDLQKKSGAQIHF-KKFTDQDYDVCVVRGRADTTQLAET 555
+ + P + +IG+ G IK ++K+SGA+I D++ + + T
Sbjct: 317 LRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDAKSA 376
Query: 556 LIHDFIKQQPTIMTESITVPSWSCGRIIGSGGENVNDISHRSGARV---KVESPKSTDKV 726
+ + Q I ++ G +IG GG VND+ ++ A + K E P+
Sbjct: 377 AVEAVLLLQSKINDDN---EGKVIGCLIGKGGSIVNDMRSKTKAAIYISKGEKPRKASSS 433
Query: 727 AEHLXTF 747
E + F
Sbjct: 434 DELVEVF 440
Score = 35.1 bits (77), Expect = 0.063
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +1
Query: 379 IEIHVPKSIVPALIGRNGSNIKDLQKKSGAQIH-FKKFTDQDYDVCVVRGRADTTQLAET 555
+E+ +P S + ++G++G+N+ ++ K SGA I + + + V + G + Q AE
Sbjct: 556 MEMTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAEN 615
Query: 556 LIHDFI 573
LI FI
Sbjct: 616 LIKAFI 621
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/54 (29%), Positives = 30/54 (55%)
Frame = +1
Query: 604 ITVPSWSCGRIIGSGGENVNDISHRSGARVKVESPKSTDKVAEHLXTFRGTKEQ 765
+T+P+ +++G G N+++I SGA +++ KS+ H+ GT EQ
Sbjct: 558 MTIPASGLSKVMGKHGTNLDNIIKISGAHIEIIESKSSRH--GHVARISGTTEQ 609
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 604 ITVPSWSCGRIIGSGGENVNDISHRSGARVKVESP 708
I P G +IG G+ +N I ++ A+VKV P
Sbjct: 53 ILCPDRVIGNVIGKNGKVINSIRQQTSAKVKVVDP 87
>01_01_0956 +
7505206-7505322,7505860-7506723,7506841-7507260,
7508091-7508342,7508696-7508953,7509798-7509877,
7509959-7510070,7510492-7510541,7511070-7511171,
7511215-7511276,7511888-7511928
Length = 785
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 550 ETLIHDFIKQQPTIMTESITVPSWSCGRIIGSGGENVNDISHRSGARVKV--ESPKSTDK 723
E L+H P +T + S G IIG GG N+ I + +G +KV PKS D+
Sbjct: 400 EALMHGHGSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDR 459
Query: 724 V 726
+
Sbjct: 460 I 460
Score = 32.3 bits (70), Expect = 0.44
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 11/117 (9%)
Frame = +1
Query: 406 VPALIGRNGSNIKDLQKKSGAQIHFKKFTDQDYD-VCVVRGRA---DTTQLAE-TLIHDF 570
V +IG+ G+NIK +Q +G +I + D + + G A D A+ ++H
Sbjct: 425 VGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAILHVQ 484
Query: 571 IKQQPTIMTES------ITVPSWSCGRIIGSGGENVNDISHRSGARVKVESPKSTDK 723
K PT T+ + V G ++G GG + ++ SGA + V S K
Sbjct: 485 RKIVPTSNTKEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPK 541
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 580 QPTIMTESITVPSWSCGRIIGSGGENVNDISHRSGARVKVE 702
QP + I P+ G +IG GG + I +G +++V+
Sbjct: 84 QPGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVD 124
>10_08_0962 +
21880919-21880983,21881100-21881487,21881807-21881931,
21882374-21882374,21882891-21883115,21888956-21889083,
21889176-21889227,21890205-21890351,21890444-21890566,
21890648-21890722,21890812-21890931,21892546-21892632,
21893115-21893183,21893262-21893353,21893465-21893584,
21893725-21893767,21893848-21893910,21894091-21894162,
21894247-21894291,21894354-21894424,21894508-21894573,
21894715-21894799
Length = 753
Score = 36.7 bits (81), Expect = 0.020
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 517 VRGRADTTQLAETLIHDFIKQQPTIMTESITVPSWSCGRIIGSGGENV 660
+ G AE L+ +F+++ +++ E I+VP G +IGSGG +
Sbjct: 645 ISGTPHQISKAENLVKEFLQEMDSMVEEEISVPMEKVGLVIGSGGATI 692
>03_03_0131 -
14706123-14706171,14706364-14706422,14706504-14706770,
14706857-14707114,14707207-14707629,14707942-14708514
Length = 542
Score = 36.7 bits (81), Expect = 0.020
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Frame = +1
Query: 400 SIVPALIGRNGSNIKDLQKKSGAQIHFKKFTDQDYDVCVVRGRADTTQLAETLIHDFIKQ 579
S V +IG+ G IK ++++SGA I +D + V + I+ +
Sbjct: 289 SNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTEDDCIITVSAKEFFEDPVSPTINAAVHL 348
Query: 580 QPTIMTES---ITVPSWSC---------GRIIGSGGENVNDISHRSGARVKVESPKSTDK 723
QP ++ +PS++ G +IG GG + +I S A +++ S ++ K
Sbjct: 349 QPRCSEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPK 408
Query: 724 VA 729
VA
Sbjct: 409 VA 410
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 592 MTESITVPSWSCGRIIGSGGENVNDISHRSGARVKVES 705
+T + VPS G IIG GG + I +GA ++V S
Sbjct: 138 VTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLS 175
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 34.7 bits (76), Expect = 0.083
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 373 NTIEIHVPKSIVPALIGRNGSNIKDLQKKSGAQIHF-KKFTDQDYDVCVVRGRADTTQLA 549
+T+E+ +PKS V +L R GS + + + SGA + + D V + G + A
Sbjct: 585 STLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISGTPEQADKA 644
Query: 550 ETLIHDFI 573
++L+ FI
Sbjct: 645 QSLLQGFI 652
>10_08_0511 +
18435745-18436499,18436624-18436742,18436788-18437372,
18438534-18438667,18439128-18439148,18439656-18439739,
18439832-18440077,18440763-18440925,18441024-18441066,
18441392-18441773,18442212-18442267,18442351-18442417,
18442542-18442721
Length = 944
Score = 34.3 bits (75), Expect = 0.11
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 592 MTESITVPSWSCGRIIGSGGENVNDISHRSGARVKVESPKSTDK 723
+T + VPS G I+G GG+ + ++ R+GA ++V S K
Sbjct: 595 LTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPK 638
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 595 TESITVPSWSCGRIIGSGGENVNDISHRSGARVKVESPKSTDKVAEHLXTFRGTKEQIE 771
T I+V + G IIG GG N IS +GA++ + +S + GT +QI+
Sbjct: 482 TAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKN--IELEGTFDQIK 538
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 376 TIEIHVPKSIVPALIGRNGSNIKDLQKKSGAQI 474
T +I V S+ +IG+ G+N K + + +GA++
Sbjct: 482 TAKISVDASLAGGIIGKGGTNTKHISRMTGAKL 514
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 595 TESITVPSWSCGRIIGSGGENVNDISHRSGARVKVESPKSTDKVAEHLXTFRGTKEQIE 771
T I+V + G IIG GG N IS +GA++ + +S + GT +QI+
Sbjct: 145 TAKISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKN--IELEGTFDQIK 201
>10_08_0948 +
21754985-21755290,21756042-21756297,21756845-21756999,
21757077-21757349,21757582-21757776,21757867-21758058
Length = 458
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 376 TIEIHVPKSIVPALIGRNGSNIKDLQKKSGAQIHFKKFTDQDYDVCV-VRGRADTTQLAE 552
T + +P + +IG G+NI ++ SGA + ++ D+ V ++G + Q A
Sbjct: 332 TQTMQIPLTYAEDIIGVKGANIAYIRANSGAVVTIQESLGSPDDITVEMKGTSSQVQAAY 391
Query: 553 TLIHD 567
LI D
Sbjct: 392 QLIQD 396
>02_01_0198 +
1334563-1334994,1335872-1335919,1336096-1336351,
1336733-1336881,1336969-1337097,1337425-1337592,
1338416-1338610
Length = 458
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +1
Query: 592 MTESITVPSWSCGRIIGSGGENVNDISHRSGARVKVESPKSTDKVAEHLXTFRGTKEQ 765
+T+++ +P IIG+ G+N++ I SGA V +E +S D E L +G+ Q
Sbjct: 339 ITQTMQIPLPFAEEIIGARGQNISYIRSVSGAVVDLE--ESRDYPNEVLVMIKGSSSQ 394
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 319 LKKDEEENDNKTVRITKINTIEIHVPKSIVPALIGRNGSNIKDLQKKSGAQIHFKKFTDQ 498
+ KD D++T KI T + +P +IG G NI ++ SGA + ++ D
Sbjct: 322 VNKDILLPDHRTPLNPKI-TQTMQIPLPFAEEIIGARGQNISYIRSVSGAVVDLEESRDY 380
Query: 499 DYDVCVV 519
+V V+
Sbjct: 381 PNEVLVM 387
>01_06_1157 - 34980585-34980774,34981579-34981742
Length = 117
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 604 ITVPSWSCGRIIGSGGENVNDI 669
+ V WSCGR++G G + N I
Sbjct: 40 MAVEQWSCGRLVGGGRKRANMI 61
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 604 ITVPSWSCGRIIGSGGENVNDISHRSGARVKV 699
I VP+ G +IG GE + + S AR+KV
Sbjct: 119 ILVPAQKVGAVIGRKGEFIKKMCEESRARIKV 150
>04_04_1069 - 30554565-30555021,30556833-30557026,30557182-30557496
Length = 321
Score = 28.3 bits (60), Expect = 7.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 632 LPQDQLGTVILSVIIVGCCLIKSC 561
L Q Q+G VI+V CC++ C
Sbjct: 5 LGQQQVGAAAALVIVVACCVVAGC 28
>03_05_0388 +
23726957-23727418,23730016-23730262,23731072-23731220,
23731313-23731597,23731665-23731889,23734251-23734445
Length = 520
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 604 ITVPSWSCGRIIGSGGENVNDISHRSGARVKV 699
I +P+ G IIG GE + + S AR+K+
Sbjct: 112 ILIPAQKVGAIIGRKGEFIKKMCEESKARIKI 143
>01_06_0660 +
30969879-30970218,30970346-30970514,30971373-30971635,
30971717-30971864,30972019-30972082,30972225-30972248
Length = 335
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 434 PTLRTFRRNLVRRSISKSSP 493
P +R+FRRNL S SK SP
Sbjct: 180 PPIRSFRRNLASSSSSKHSP 199
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,753,933
Number of Sequences: 37544
Number of extensions: 349429
Number of successful extensions: 831
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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