Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P05_F_J17
(681 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0036 + 25786530-25786756,25788000-25788076,25788538-257886... 41 0.001
06_03_1338 - 29440373-29440534,29440993-29441083,29441799-294419... 36 0.030
09_04_0410 + 17362751-17363698 35 0.069
08_02_0997 + 23409932-23410894 34 0.091
02_05_0955 - 33056171-33057256 34 0.091
07_03_0503 + 18839863-18841209 33 0.16
07_03_0659 + 20395422-20396765 33 0.21
01_01_0379 - 2956396-2957409 33 0.21
11_01_0727 - 6010537-6010548,6011029-6011606,6011709-6011774,601... 33 0.28
08_02_1485 - 27466761-27467753 33 0.28
04_04_0005 + 22095107-22095210,22095347-22095431,22095553-220956... 32 0.37
09_04_0239 + 15954995-15956242 32 0.48
06_01_0781 + 5846501-5847490 31 0.64
09_04_0413 + 17372852-17373787 31 1.1
12_01_0913 + 8882193-8883510,8887633-8887865,8889619-8889871,889... 30 1.5
09_04_0409 + 17359459-17360622 30 1.5
09_04_0240 + 15958110-15958305,15959586-15960763 30 1.5
09_04_0421 + 17417851-17418840 30 2.0
07_03_0669 - 20542481-20542489,20543212-20543872,20543899-205439... 30 2.0
04_04_0052 + 22386553-22387506 30 2.0
07_03_0665 + 20470160-20471542 29 3.4
07_01_0446 - 3371829-3372132,3374691-3375673 29 4.5
09_04_0378 - 17091407-17092369 28 6.0
01_06_1701 - 39290537-39291077,39292110-39292801 28 6.0
>01_06_0036 +
25786530-25786756,25788000-25788076,25788538-25788625,
25788706-25788786,25788866-25788940,25789048-25789149,
25789589-25789726,25791559-25791585,25791696-25791786,
25792423-25792584
Length = 355
Score = 40.7 bits (91), Expect = 0.001
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +3
Query: 366 LNVFAPKMPGDERGCPVVFFVHGGNYKSGSASAYG---GQHLTQKDTILVTAQYRLGSLG 536
L+++ PK R CPVV FV GG + G A+G G+ L ++ I+ YR G
Sbjct: 132 LDLYIPK--DINRPCPVVAFVTGGAWIIGY-KAWGSLLGRRLAERGIIVACIDYRNFPQG 188
Query: 537 YLSTDEXDAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSG 677
+ DA+ + +++ + I +GGDP R ++GQ +G
Sbjct: 189 TIGDMVSDASQGI---------SYVCNNIASYGGDPNRIYLVGQSAG 226
>06_03_1338 -
29440373-29440534,29440993-29441083,29441799-29441942,
29442094-29442159,29442589-29442729,29443077-29443178,
29443264-29443338,29443469-29443549,29443670-29443739,
29444063-29444139,29444392-29444660
Length = 425
Score = 35.9 bits (79), Expect = 0.030
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = +3
Query: 387 MPGDERGC-PVVFFVHGGNYKSGSAS--AYGGQHLTQKDTILVTAQYRLGSLGYLSTDEX 557
+P D G PVV FV GG + G A G+ L ++ ++ YR G +
Sbjct: 144 IPTDRTGLKPVVAFVTGGAWIIGYKGWGALLGRRLAERGILVACIDYRNFPQGTIGDMVE 203
Query: 558 DAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSG 677
DA+ + A++ + I +GGDP R ++GQ +G
Sbjct: 204 DASQGI---------AFVCNNIASYGGDPERIYLVGQSAG 234
>09_04_0410 + 17362751-17363698
Length = 315
Score = 34.7 bits (76), Expect = 0.069
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Frame = +3
Query: 360 LCLNVFAPKMPGDERGCPVVFFVHGGNYKSGSASA-----YGGQHLTQKDTILVTAQYRL 524
L + ++ PK+ + PV+ F HGG + SA + Y ++V+ YRL
Sbjct: 58 LSVRLYLPKIQEPSKKLPVLVFFHGGGFLIESADSSTYHNYVNPFAAAAGVVVVSVDYRL 117
Query: 525 GSLGYLSTDEXDAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSGG 680
L D+ + L+ A W+ ++ GD +R + G +GG
Sbjct: 118 APEHPLPAAYDDSWAGL-LWAASAQDGWLAEH-----GDVSRLFIAGDSAGG 163
>08_02_0997 + 23409932-23410894
Length = 320
Score = 34.3 bits (75), Expect = 0.091
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
Frame = +3
Query: 360 LCLNVFAPKMPGDERGC-PVVFFVHGGNYKSGSAS-----AYGGQHLTQKDTILVTAQYR 521
L ++ P + G ER PVV ++HGG GSA+ + + + ++V+ YR
Sbjct: 56 LWARLYLPDLDGGERKLLPVVVYLHGGGLVVGSAADALEHGFANRLCARARALVVSVDYR 115
Query: 522 LGSLGYLSTDEXDAAGNVGLFDLHAVMA--WIQDYITFFGGDPTRXVVMGQGSGG 680
L + DA + + + A A W++D+ GD R V+G SGG
Sbjct: 116 LAPEHPVPACYDDAWSAL-QWAVAAASADPWLRDH-----GDRERVFVLGYSSGG 164
>02_05_0955 - 33056171-33057256
Length = 361
Score = 34.3 bits (75), Expect = 0.091
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +3
Query: 393 GDERGCPVVFFVHGGNYKSGSASA-----YGGQHLTQKDTILVTAQYRL 524
GD R P+V +VHGG + +GSASA Y + ++V+ YRL
Sbjct: 85 GDGRRLPLVVYVHGGAFCTGSASARMFHDYAESLSARAAAVVVSVDYRL 133
>07_03_0503 + 18839863-18841209
Length = 448
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +3
Query: 372 VFAPKMPGDERGCPVVFFVHGGNYKSGSA-----SAYGGQHLTQKDTILVTAQYRLGSLG 536
+F P G+ R P+V + HGG + +GSA Y + ++V+ +YRL
Sbjct: 82 LFLPGGGGEGRRLPLVLYFHGGAFVTGSAFGRLFHRYAASLAARAGALVVSVEYRLAPEH 141
Query: 537 YLSTDEXDAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSG 677
L D + + W+ Y DPTR + G+ +G
Sbjct: 142 PLPAAFADGWAAL-RWAASLADPWVARY-----ADPTRLFLAGESAG 182
>07_03_0659 + 20395422-20396765
Length = 447
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Frame = +3
Query: 393 GDERGCPVVFFVHGGNYKSGSA-----SAYGGQHLTQKDTILVTAQYRLGSLGYLSTDEX 557
G R PV+ ++HGG++ + SA Y ++ ++V+ +YRL +
Sbjct: 78 GSRRRLPVILYIHGGSFCTESAFCRTYHRYAASLASRAGALVVSVEYRLAPEHPVPAAHD 137
Query: 558 DAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSGG 680
DA + W+ +Y DP+R + G +GG
Sbjct: 138 DAWAALRWVG-SLSDPWLANY-----ADPSRTFIAGDSAGG 172
>01_01_0379 - 2956396-2957409
Length = 337
Score = 33.1 bits (72), Expect = 0.21
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Frame = +3
Query: 360 LCLNVFAPKMPGDERGCPVVFFVHGGNYKSGSASAYGGQHLTQK-----DTILVTAQYRL 524
L L V+ P GD PV+ HGG Y G+ Q+ ++++A YRL
Sbjct: 64 LKLRVYRPPTAGDAERLPVLVCFHGGGYCLGTFEKPSFHCCCQRLASELRAVVLSADYRL 123
Query: 525 GSLGYLSTDEXDAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSGG 680
G L D A + A+ D D R V G+ +GG
Sbjct: 124 GPEHRLPAAIDDGAAVLSWLRDQAMSGPGADSWLAESADFARVFVAGESAGG 175
>11_01_0727 -
6010537-6010548,6011029-6011606,6011709-6011774,
6011867-6011964,6013238-6013608
Length = 374
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 381 PKMPGDERGCPVVFFVHGGNYKSGSASAYGGQH 479
P PG +G P V +GGN + G AYGG +
Sbjct: 319 PTYPGSNQGAPGVNPGYGGNNRQGPGPAYGGDN 351
>08_02_1485 - 27466761-27467753
Length = 330
Score = 32.7 bits (71), Expect = 0.28
Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Frame = +3
Query: 369 NVFAPKMPGDERGCPVVFFVHGGNY---KSGSASAYGGQHLTQK--DTILVTAQYRLGSL 533
N +P P + PV+ + HGG + +GS + I+V+ YRL
Sbjct: 67 NPASPPPPPTSK-LPVILYFHGGGFVLFSTGSVFYHASCEAMAAAVPAIVVSLDYRLAPE 125
Query: 534 GYLSTDEXDAAGNV-GLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSGG 680
L DAA V L D A WI + GD +R VMG SGG
Sbjct: 126 HRLPAAYDDAASAVLWLRDAAAGDPWIAAH-----GDLSRCFVMGSSSGG 170
>04_04_0005 +
22095107-22095210,22095347-22095431,22095553-22095623,
22096613-22096727,22096884-22096963,22097302-22097386,
22098081-22098175,22098298-22098348,22098866-22098946,
22099659-22099731,22100057-22100134,22100224-22100256
Length = 316
Score = 32.3 bits (70), Expect = 0.37
Identities = 26/90 (28%), Positives = 42/90 (46%)
Frame = +3
Query: 411 PVVFFVHGGNYKSGSASAYGGQHLTQKDTILVTAQYRLGSLGYLSTDEXDAAGNVGLFDL 590
PVVF +HGG Y SG + A + +K + V+ R G ++D+ D + D+
Sbjct: 75 PVVFCLHGGGY-SGLSFALAASRMKEKARV-VSMDLR-GHGKSTTSDDSDLSIETLSSDV 131
Query: 591 HAVMAWIQDYITFFGGDPTRXVVMGQGSGG 680
AV+ T +G P +++G GG
Sbjct: 132 IAVLR------TLYGDSPPAIILVGHSMGG 155
>09_04_0239 + 15954995-15956242
Length = 415
Score = 31.9 bits (69), Expect = 0.48
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +3
Query: 402 RGCPVVFFVHGGNYKSGSASA-----YGGQHLTQKDTILVTAQYRL 524
R P+V +VHGG + SGSASA Y + ++V+ YRL
Sbjct: 92 RRLPLVVYVHGGAFCSGSASAPPFHRYAESLAARAAAVVVSVDYRL 137
>06_01_0781 + 5846501-5847490
Length = 329
Score = 31.5 bits (68), Expect = 0.64
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Frame = +3
Query: 360 LCLNVFAPKMPGDERG-CPVVFFVHGGNYKSGSAS-----AYGGQHLTQKDTILVTAQYR 521
L +F P G +G PVV + HGG Y GSA+ +Y + + + V +YR
Sbjct: 63 LWARLFLPPGGGAPQGKLPVVVYYHGGAYVVGSAADPFTHSYLNGLVAEAGILAVALEYR 122
Query: 522 LGSLGYLSTDEXDAAGNVGLFDLHA-----VMAWIQDYITFFGGDPTRXVVMGQGSGG 680
L +L D+ + HA V W+ ++ GD +R + G +GG
Sbjct: 123 LAPEHHLPAAYDDSWEGLRWVASHANGGGGVEPWLLEH-----GDFSRVFLAGASAGG 175
>09_04_0413 + 17372852-17373787
Length = 311
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Frame = +3
Query: 360 LCLNVFAPKMPGDERGCPVVFFVHGGNYKSGSA-----SAYGGQHLTQKDTILVTAQYRL 524
L + VF P P + PV+ F HGG + SA Y + V+ +YRL
Sbjct: 56 LSVRVFLPARPDPSKKLPVLVFFHGGAFVIESAFSTTYHGYAASLAAAAGVVAVSVEYRL 115
>12_01_0913 +
8882193-8883510,8887633-8887865,8889619-8889871,
8891281-8891470,8891641-8891773,8891797-8891886
Length = 738
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/52 (34%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Frame = +2
Query: 44 CSADLVSSRYSCCRRCAGVTSGTRCSCSFHPAT---WQKREARGSQRRQTRL 190
C + + C AG TS RC F PA+ W RE G RR L
Sbjct: 305 CDSYAKCGAFGLCDSNAGATSICRCVKGFSPASPAEWSMREYSGGCRRDVAL 356
>09_04_0409 + 17359459-17360622
Length = 387
Score = 30.3 bits (65), Expect = 1.5
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Frame = +3
Query: 366 LNVFAPKMPGDERGCPVVFFVHGGNYKSGSASA-----YGGQHLTQKDTILVTAQYRLGS 530
+ +F PK+ + PVV F HGG + SA + Y ++V+ YRL
Sbjct: 134 VRLFLPKLQEPSKKLPVVVFFHGGAFFIESAGSETYHNYVNSLAAAAGVLVVSVDYRLAP 193
Query: 531 LGYLSTDEXDAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSG 677
L D+ + + A WI ++ GD R V G +G
Sbjct: 194 EHPLPAGYDDSWAAL-QWAASAQDGWIAEH-----GDTARLFVAGDSAG 236
>09_04_0240 + 15958110-15958305,15959586-15960763
Length = 457
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
Frame = +3
Query: 402 RGCPVVFFVHGGNYKSGSASA-----YGGQHLTQKDTILVTAQYRL 524
R P+V +VHGG + +GSASA Y + ++V+ YRL
Sbjct: 114 RRLPLVVYVHGGAFCTGSASARMFHDYAESLSARAAAVVVSVDYRL 159
>09_04_0421 + 17417851-17418840
Length = 329
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +3
Query: 354 DCLCLNVFAPKMP--GDERGCPVVFFVHGGNYKSGSA-----SAYGGQHLTQKDTILVTA 512
D + ++ P P G R PV+ F HGG + GSA + + + I+V+
Sbjct: 59 DGVSARIYLPSTPASGYGRRLPVLVFFHGGGFCLGSAFDAATHGHANRLAARAGVIVVSV 118
Query: 513 QYRL 524
+YRL
Sbjct: 119 EYRL 122
>07_03_0669 -
20542481-20542489,20543212-20543872,20543899-20543983,
20545311-20546625
Length = 689
Score = 29.9 bits (64), Expect = 2.0
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +3
Query: 333 DRFIGHEDCLCLNVFAPK-MPGDERGCPVVFFVHGGNYKSGSA-----SAYGGQHLTQKD 494
D I + + +F P G R PVV + HGG + + SA Y ++
Sbjct: 56 DVIIDERNGVSARLFLPSGADGGRRLLPVVVYFHGGCFCTESAFGRTYHRYAASLASRAG 115
Query: 495 TILVTAQYRLGSLGYLSTDEXDAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGS 674
++V+ +YRL + DA + + W+ D+ DP R V G +
Sbjct: 116 ALVVSVEYRLAPEHPVPAAHDDAWAAL-RWAASLSDPWLADH-----ADPGRTFVAGDSA 169
Query: 675 GG 680
GG
Sbjct: 170 GG 171
>04_04_0052 + 22386553-22387506
Length = 317
Score = 29.9 bits (64), Expect = 2.0
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 6/102 (5%)
Frame = +3
Query: 393 GDERGCPVVFFVHGGNYKSGSASAYGGQHLTQKD------TILVTAQYRLGSLGYLSTDE 554
G ER PVV + HGG + GSA A H D + V+ YRL L
Sbjct: 72 GGER-LPVVVYFHGGGFVIGSA-ASPAYHRCLNDLAAACPAVAVSVDYRLAPEHPLPAAY 129
Query: 555 XDAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSGG 680
D+A + + L A W+ + GD +R + G +GG
Sbjct: 130 EDSAAALA-WVLSAADPWLAVH-----GDLSRVFLAGDSAGG 165
>07_03_0665 + 20470160-20471542
Length = 460
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Frame = +3
Query: 393 GDERGCPVVFFVHGGNYKSGSA-----SAYGGQHLTQKDTILVTAQYRLGSLGYLSTDEX 557
G R PVV + HGG++ + SA Y ++ ++V+ +YRL +
Sbjct: 93 GGGRRLPVVLYFHGGSFCTESAFCRTYHRYASSLASRAGALVVSVEYRLAPEHPIPAAYD 152
Query: 558 DAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSGG 680
DA + W+ +Y GD R V G +GG
Sbjct: 153 DAWAAFRWVE-SLSDPWLAEY-----GDLRRTFVAGDSAGG 187
>07_01_0446 - 3371829-3372132,3374691-3375673
Length = 428
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 6/102 (5%)
Frame = +3
Query: 393 GDERGCPVVFFVHGGNYKSGSA---SAYGG--QHLTQKDTILVTAQYRLGSLGYLSTDEX 557
G E PVV + HGG + GS + + G + + ++++ YRL L
Sbjct: 76 GAEEKLPVVVYFHGGGFCIGSCTWPNFHAGCLRLAAELPAVVLSFDYRLAPEHRLPAAHE 135
Query: 558 DAAGN-VGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSGG 680
DAA + L D W+ D D + V G+ +GG
Sbjct: 136 DAAAALIWLRDQLLSDPWLAD-----AADARKVFVSGESAGG 172
>09_04_0378 - 17091407-17092369
Length = 320
Score = 28.3 bits (60), Expect = 6.0
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Frame = +3
Query: 381 PKMPGDERGCPVVFFVHGGNYKSGSAS-----AYGGQHLTQKDTILVTAQYRLGSLGYLS 545
P D + P++ F H G + GSAS Y + + V YRL L
Sbjct: 67 PATDDDGKKLPILLFFHAGYFVVGSASWPPVHRYTNSVVASARVVAVAVNYRLAPEHLLP 126
Query: 546 TDEXDAAGNVGLFDLHAVMAWIQDYITFFGGDPTRXVVMGQGSGG 680
T D+ + + + W+ + GD R + G +GG
Sbjct: 127 TAYDDSWAALS-WAVSGADPWLSAH-----GDTGRVFLSGASAGG 165
>01_06_1701 - 39290537-39291077,39292110-39292801
Length = 410
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Frame = +3
Query: 402 RGCPVVFFVHGGNYKSGSASAYGGQHLTQK-----DTILVTAQYRL 524
R P+V HGG + SGS+S+ ++ D I+V YRL
Sbjct: 130 RRLPIVVQFHGGGFVSGSSSSAANDAFCRRVAKMCDAIVVAVGYRL 175
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,416,649
Number of Sequences: 37544
Number of extensions: 418980
Number of successful extensions: 1082
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1721314888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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