Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_J11
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-8|CAA86746.1|  253|Caenorhabditis elegans Hypothetical pr...   118   4e-27
AF016683-7|AAM97999.1|  609|Caenorhabditis elegans Hypothetical ...    31   0.75 
Z81500-9|CAB04098.2|  141|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z66496-6|CAA91281.3|  191|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z48585-12|CAI46589.1|  191|Caenorhabditis elegans Hypothetical p...    30   2.3  
AL132902-8|CAC14423.2|  699|Caenorhabditis elegans Hypothetical ...    30   2.3  
Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical pr...    29   3.0  
U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical pr...    29   4.0  
Z81037-6|CAB02748.2|  414|Caenorhabditis elegans Hypothetical pr...    28   9.2  
Z79755-8|CAB02113.1|  270|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AF169201-1|AAF01678.1|  270|Caenorhabditis elegans CES-1 protein.      28   9.2  

>Z46787-8|CAA86746.1|  253|Caenorhabditis elegans Hypothetical
           protein C16C10.8 protein.
          Length = 253

 Score =  118 bits (285), Expect = 4e-27
 Identities = 56/145 (38%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
 Frame = +2

Query: 179 MVVFTCSHCGESVQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDYESHIKCITEEERY 358
           MV F+C++CGE+ +K +VE+H L +CRN     SC+DC   +  + Y+ H+KCITE ++Y
Sbjct: 1   MVFFSCNNCGEACKKNQVERH-LFQCRNTT--FSCIDCQLVYTRETYKDHVKCITENQKY 57

Query: 359 SGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINF 538
            GK +  KE KGE KQNAWV+ +   ++    +   V+ ++++++   N PRK+ KFINF
Sbjct: 58  GGKNYVEKENKGEAKQNAWVDQVNRAIEFVTDS--QVKELLKSVAGFANIPRKEAKFINF 115

Query: 539 VKNVCGHKTNPKDID-QAWEFISVK 610
           + N C  +   K++  +AW+ I+ +
Sbjct: 116 LTNSC--RLRDKNLALRAWQAIAAE 138


>AF016683-7|AAM97999.1|  609|Caenorhabditis elegans Hypothetical
           protein K09F6.9 protein.
          Length = 609

 Score = 31.5 bits (68), Expect = 0.75
 Identities = 19/75 (25%), Positives = 35/75 (46%)
 Frame = +2

Query: 296 KDFLGKDYESHIKCITEEERYSGKGFTAKEKKGEKKQNAWVEMLQSVLDEQKSAPQNVRR 475
           K+   K  E H+    + E ++ K  T K+++ EK  +   +  Q+  D+QK   +  ++
Sbjct: 150 KEEKNKQREKHLATHKKAEEFARKVRTDKDEQREKHLDTHKKAEQNAQDDQKYHDEARKK 209

Query: 476 IIETISKHNNTPRKK 520
            IET  K      K+
Sbjct: 210 YIETQKKAEENEEKR 224


>Z81500-9|CAB04098.2|  141|Caenorhabditis elegans Hypothetical
           protein F11D11.6 protein.
          Length = 141

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -1

Query: 220 LNRLPTMTACKNNHFL*NTCELGLFVLNAKCITLNF 113
           L    T+  CKN  F+ N C L LFV++ KCI  ++
Sbjct: 43  LTAFKTVGECKNGCFVKNDCFLALFVID-KCIFFSY 77


>Z66496-6|CAA91281.3|  191|Caenorhabditis elegans Hypothetical
           protein E04D5.4 protein.
          Length = 191

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +2

Query: 125 YTFCIQNK*PQFTRVLQEMVVFTCSHCGE-SVQKPKVEKHYLTKCRNKNPNLSCMDCFKD 301
           YTF   N   ++T +LQ+    TC  CG  S   P       T+C   N N  C   + D
Sbjct: 115 YTFLCSNA--KYTPLLQQFCAKTCGFCGSGSTAAPVACVDTSTQCAYWNKNGFCSSIYYD 172


>Z48585-12|CAI46589.1|  191|Caenorhabditis elegans Hypothetical
           protein E04D5.4 protein.
          Length = 191

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
 Frame = +2

Query: 125 YTFCIQNK*PQFTRVLQEMVVFTCSHCGE-SVQKPKVEKHYLTKCRNKNPNLSCMDCFKD 301
           YTF   N   ++T +LQ+    TC  CG  S   P       T+C   N N  C   + D
Sbjct: 115 YTFLCSNA--KYTPLLQQFCAKTCGFCGSGSTAAPVACVDTSTQCAYWNKNGFCSSIYYD 172


>AL132902-8|CAC14423.2|  699|Caenorhabditis elegans Hypothetical
           protein Y71A12B.9 protein.
          Length = 699

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +2

Query: 197 SHCGESVQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDYESH 328
           S+ G+ V+  ++ K +  +C N N +L C+ C +   G++   H
Sbjct: 37  SNRGKVVKNQEIIKTFCDECDNCNKSLMCLTCGRILCGRNDSGH 80


>Z46676-6|CAA86666.1|  503|Caenorhabditis elegans Hypothetical
           protein C08B11.8 protein.
          Length = 503

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 208 PTMTACKNNHFL*NTCELGLFVLNAKCITLNFKMI 104
           P++    N HF  N+  LGLF+     +T NF +I
Sbjct: 192 PSLLVIDNGHFQYNSISLGLFLATYMFLTKNFTII 226


>U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical
           protein F48E3.4 protein.
          Length = 279

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 20/56 (35%), Positives = 29/56 (51%)
 Frame = +3

Query: 192 HAVIVGSLFRSPKWKSIISLNVGIKIQICHVWTVSKIF*EKIMNRISSALLKKKDT 359
           H  +V  L +  K K+I S   G  +    V T SK F +   N I+ A++KKKD+
Sbjct: 28  HQYLVKVLTKDTKLKNI-STCTGTLLSPSVVLTSSKCFPDTRKNLIAQAIIKKKDS 82


>Z81037-6|CAB02748.2|  414|Caenorhabditis elegans Hypothetical
           protein C17E4.10 protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
 Frame = +2

Query: 206 GESVQKPKVEKHYLTKCRNKN-PNLSCMDCFKDFLGKDYESHIKCITEEERYSGKGFTAK 382
           G  +  P+ E+  L     K+ P LS    F DF  +  E       EE+  +    T +
Sbjct: 80  GAPIATPEDEEQLLDDLEIKSAPLLSPRRTFADFEDRSSEEKENRRIEEDDDTEADTTIR 139

Query: 383 EKKGEKKQNAWVEMLQSVLDEQKSAPQNVRRIIETISKHNNTPRKKPKFINFVKN 547
           E+   +K+       + VL E+K      +  +ET+ +H     + P FI  V++
Sbjct: 140 EEFDYEKE-------EEVLKEEKIID---KPNVETVEEHKENKNESPDFIRMVES 184


>Z79755-8|CAB02113.1|  270|Caenorhabditis elegans Hypothetical
           protein F43G9.11 protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 188 FTCSHCGES-VQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDY 319
           F+C+HCG+S   +  +  H LT   +K     C  C + F  + Y
Sbjct: 219 FSCAHCGKSFADRSNLRAHMLTHTGDK--RFECDKCGRRFALRAY 261


>AF169201-1|AAF01678.1|  270|Caenorhabditis elegans CES-1 protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 188 FTCSHCGES-VQKPKVEKHYLTKCRNKNPNLSCMDCFKDFLGKDY 319
           F+C+HCG+S   +  +  H LT   +K     C  C + F  + Y
Sbjct: 219 FSCAHCGKSFADRSNLRAHMLTHTGDK--RFECDKCGRRFALRAY 261


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,239,950
Number of Sequences: 27780
Number of extensions: 345950
Number of successful extensions: 1242
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)