Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_J09
         (379 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   0.77 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   0.77 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   0.77 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   3.1  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   3.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   7.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   7.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   9.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    20   9.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    20   9.5  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 184 QCGYSTFIDPQW*SIAGCITFLQ*FLEHSH 273
           +C ++  I P    +   + FLQ FL H H
Sbjct: 188 ECSFAESIPPYLFFVPPPLMFLQDFLSHQH 217


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 184 QCGYSTFIDPQW*SIAGCITFLQ*FLEHSH 273
           +C ++  I P    +   + FLQ FL H H
Sbjct: 421 ECSFAESIPPYLFFVPPPLMFLQDFLSHQH 450


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 0.77
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 184 QCGYSTFIDPQW*SIAGCITFLQ*FLEHSH 273
           +C ++  I P    +   + FLQ FL H H
Sbjct: 421 ECSFAESIPPYLFFVPPPLMFLQDFLSHQH 450


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/47 (21%), Positives = 26/47 (55%)
 Frame = +2

Query: 215 NGEVLLAALHFFNNSLNTLTNKTIEDTLLTIRQYESARVEYDAYRSE 355
           NG+++L +LH +  +++ +   T    +++    E+  +   AY++E
Sbjct: 141 NGQIMLNSLHKYKPTVHLVRVGTEPRRVISFPFPETQFIAVTAYQNE 187


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 69  KRRTALYLRCVYTDHLNLGLQ 7
           K RT    R VYTDH  + L+
Sbjct: 152 KTRTKDKYRVVYTDHQRVELE 172


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 95  QAALPEMSSNVELHCTCV 42
           Q   P  ++ V  HC CV
Sbjct: 138 QVCTPNATNTVWSHCQCV 155


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 95  QAALPEMSSNVELHCTCV 42
           Q   P  ++ V  HC CV
Sbjct: 138 QVCTPNATNTVWSHCQCV 155


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = -1

Query: 292 ILNSFIGESVQGIIEEM*CSQQYFTIAGQ*TLSI 191
           I+  F  E++  ++++   +Q++  +AG  TLS+
Sbjct: 451 IVALFKNENLSEMVKQFLFTQKFTFVAGLATLSV 484


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 241 TFLQ*FLEH 267
           TFLQ FLEH
Sbjct: 231 TFLQLFLEH 239


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 241 TFLQ*FLEH 267
           TFLQ FLEH
Sbjct: 157 TFLQLFLEH 165


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,860
Number of Sequences: 336
Number of extensions: 1742
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)