Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_J09
         (379 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    27   0.30 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   3.7  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   3.7  

>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 251 NNSLNTLTNKTIEDTLLTIRQYESARVEYDAYRSELXAAGG 373
           + +L  +  KTIED LL I Q    ++  D + ++L  +GG
Sbjct: 231 SEALKPIIAKTIEDILLAIMQNIFHQLPADYFVADLPRSGG 271


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 119 HVECQRREQAALPEMSSNVELHCTCVAFTRTI 24
           H  C +     +  + SNV+LH +C+  T  +
Sbjct: 40  HRGCCKLPPELIDAVLSNVDLHWSCIGCTNML 71


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 12/39 (30%), Positives = 16/39 (41%)
 Frame = -3

Query: 320 IHTVLLSIMYPQ*FYW*ECSRNY*RNVMQPAILHHCGSM 204
           +H     I  P    +     NY   +M  AILHH G +
Sbjct: 98  LHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKV 136


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,400
Number of Sequences: 2352
Number of extensions: 7600
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)