Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_J09
         (379 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22178-8|CAD82913.1|  307|Caenorhabditis elegans Hypothetical pr...    65   1e-11
Z22178-7|CAA80157.2|  288|Caenorhabditis elegans Hypothetical pr...    65   1e-11
AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical ...    27   4.5  
Z48621-10|CAA88539.1|  225|Caenorhabditis elegans Hypothetical p...    27   5.9  
AF286218-1|AAF88063.1|  225|Caenorhabditis elegans VAB-15 protein.     27   5.9  
Z95559-17|CAL44975.1|  331|Caenorhabditis elegans Hypothetical p...    26   7.8  
Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical pr...    26   7.8  
Z30215-5|CAA82938.1|  199|Caenorhabditis elegans Hypothetical pr...    26   7.8  
X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2 prot...    26   7.8  

>Z22178-8|CAD82913.1|  307|Caenorhabditis elegans Hypothetical
           protein F54C8.7b protein.
          Length = 307

 Score = 65.3 bits (152), Expect = 1e-11
 Identities = 35/108 (32%), Positives = 56/108 (51%)
 Frame = +2

Query: 44  RKYSAVXXXXXXXXXXXXXXFDTQRALGEAFADLAQKSPELQNQFLYNADTQRSLTRNGE 223
           R+Y  V               + ++ L E+F  L+ K  +++ Q    ++T R +     
Sbjct: 108 RRYGLVVAAAKNFSHVLTQMAEAEKKLSESFYQLSMKEEQIKAQCTMTSETMRGVGEQAA 167

Query: 224 VLLAALHFFNNSLNTLTNKTIEDTLLTIRQYESARVEYDAYRSELXAA 367
            L A L +F +S+ T+ N+TI DTL TI   ESAR+EYD  R+++ AA
Sbjct: 168 SLDACLRYFISSMETVYNQTITDTLHTIYNTESARIEYDVDRNDISAA 215


>Z22178-7|CAA80157.2|  288|Caenorhabditis elegans Hypothetical
           protein F54C8.7a protein.
          Length = 288

 Score = 65.3 bits (152), Expect = 1e-11
 Identities = 35/108 (32%), Positives = 56/108 (51%)
 Frame = +2

Query: 44  RKYSAVXXXXXXXXXXXXXXFDTQRALGEAFADLAQKSPELQNQFLYNADTQRSLTRNGE 223
           R+Y  V               + ++ L E+F  L+ K  +++ Q    ++T R +     
Sbjct: 89  RRYGLVVAAAKNFSHVLTQMAEAEKKLSESFYQLSMKEEQIKAQCTMTSETMRGVGEQAA 148

Query: 224 VLLAALHFFNNSLNTLTNKTIEDTLLTIRQYESARVEYDAYRSELXAA 367
            L A L +F +S+ T+ N+TI DTL TI   ESAR+EYD  R+++ AA
Sbjct: 149 SLDACLRYFISSMETVYNQTITDTLHTIYNTESARIEYDVDRNDISAA 196


>AC006651-6|AAF39868.1|  833|Caenorhabditis elegans Hypothetical
           protein H06I04.3a protein.
          Length = 833

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 322 GKGGVRRVPQRAXGGGG 372
           G+GG R +P++  GGGG
Sbjct: 803 GRGGKRGIPKKTGGGGG 819


>Z48621-10|CAA88539.1|  225|Caenorhabditis elegans Hypothetical
           protein R07B1.1 protein.
          Length = 225

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 129 KHLLTSHRNHRNCRTNFSTMRILNV 203
           K +L  H+N+R  RT FST +++++
Sbjct: 120 KCMLRKHKNNRKPRTPFSTQQLISL 144


>AF286218-1|AAF88063.1|  225|Caenorhabditis elegans VAB-15 protein.
          Length = 225

 Score = 26.6 bits (56), Expect = 5.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 129 KHLLTSHRNHRNCRTNFSTMRILNV 203
           K +L  H+N+R  RT FST +++++
Sbjct: 120 KCMLRKHKNNRKPRTPFSTQQLISL 144


>Z95559-17|CAL44975.1|  331|Caenorhabditis elegans Hypothetical
           protein Y41E3.19 protein.
          Length = 331

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 110 CQRREQAALPEMSSNVELHCTCVAFTRTISI 18
           CQR    ++ EMSSN      C  F+ T+S+
Sbjct: 180 CQRPRARSISEMSSNSLCSEDCSLFSMTLSV 210


>Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical
           protein F53F1.5 protein.
          Length = 215

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 371 PPPPXARCGTRRTPPLPI 318
           PPPP   CG    PPL +
Sbjct: 33  PPPPPCGCGAPALPPLQL 50


>Z30215-5|CAA82938.1|  199|Caenorhabditis elegans Hypothetical
           protein F40F12.7 protein.
          Length = 199

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -3

Query: 212 GSMNVEYPHCREIGSAVPVISVRGQQMLHPAHVECQRREQAALPEMSSNVELH 54
           GS + E  H  +IGS+   +   G Q       E  R+ Q+  P M  NV+L+
Sbjct: 129 GSADGEVIH--QIGSSAMSVGEGGHQSRTNQETETNRQNQSQQPLMDINVQLN 179


>X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2
           protein.
          Length = 231

 Score = 26.2 bits (55), Expect = 7.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 371 PPPPXARCGTRRTPPLPI 318
           PPPP   CG    PPL +
Sbjct: 33  PPPPPCGCGAPALPPLQL 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,537,537
Number of Sequences: 27780
Number of extensions: 160846
Number of successful extensions: 494
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 470
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)