Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P05_F_J04
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3970|AAM70795.2|  126|Drosophila melanogaster CG30423-P...   111   5e-25
BT001754-1|AAN71509.1|  126|Drosophila melanogaster RH04491p pro...   109   3e-24
AF145629-1|AAD38604.1|  985|Drosophila melanogaster BcDNA.GH0558...    28   8.5  
AE013599-714|AAM68837.1|  985|Drosophila melanogaster CG8740-PC,...    28   8.5  
AE013599-713|AAM68836.1|  985|Drosophila melanogaster CG8740-PB,...    28   8.5  
AE013599-712|AAF59045.1|  985|Drosophila melanogaster CG8740-PA,...    28   8.5  

>AE013599-3970|AAM70795.2|  126|Drosophila melanogaster CG30423-PB
           protein.
          Length = 126

 Score =  111 bits (268), Expect = 5e-25
 Identities = 59/116 (50%), Positives = 77/116 (66%)
 Frame = +2

Query: 152 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAG 331
           MA +KGL   AF   IG+TF+ILACA+P  K+++PFFV+LFY+L  +P  IARR T   G
Sbjct: 1   MATLKGLFICAFLTCIGVTFLILACAVPTTKIFYPFFVLLFYVLSVLPVFIARRTT--PG 58

Query: 332 GSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGF 499
              +   E A F+T G ++S+FALPIVLA A VI W A  LT+  N+I Y TI  +
Sbjct: 59  NETNPKSEFAHFLTAGMVLSAFALPIVLAHALVITWTASILTIISNIINYGTIFWY 114


>BT001754-1|AAN71509.1|  126|Drosophila melanogaster RH04491p
           protein.
          Length = 126

 Score =  109 bits (262), Expect = 3e-24
 Identities = 58/116 (50%), Positives = 76/116 (65%)
 Frame = +2

Query: 152 MAGIKGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAG 331
           MA +K L   AF   IG+TF+ILACA+P  K+++PFFV+LFY+L  +P  IARR T   G
Sbjct: 1   MATLKALFICAFLTCIGVTFLILACAVPTTKIFYPFFVLLFYVLSVLPVFIARRTT--PG 58

Query: 332 GSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGF 499
              +   E A F+T G ++S+FALPIVLA A VI W A  LT+  N+I Y TI  +
Sbjct: 59  NETNPKSEFAHFLTAGMVLSAFALPIVLAHALVITWTASILTIISNIINYGTIFWY 114


>AF145629-1|AAD38604.1|  985|Drosophila melanogaster BcDNA.GH05582
           protein.
          Length = 985

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -1

Query: 500 RNPRSSDIRSRYRPV*GN----MHPKKSHQPWRELS 405
           R PR+SD+R  Y P          P  S  PW++LS
Sbjct: 83  RPPRASDVRPSYSPTSNGAPLASRPSHSPSPWQQLS 118


>AE013599-714|AAM68837.1|  985|Drosophila melanogaster CG8740-PC,
           isoform C protein.
          Length = 985

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -1

Query: 500 RNPRSSDIRSRYRPV*GN----MHPKKSHQPWRELS 405
           R PR+SD+R  Y P          P  S  PW++LS
Sbjct: 83  RPPRASDVRPSYSPTSNGAPLASRPSHSPSPWQQLS 118


>AE013599-713|AAM68836.1|  985|Drosophila melanogaster CG8740-PB,
           isoform B protein.
          Length = 985

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -1

Query: 500 RNPRSSDIRSRYRPV*GN----MHPKKSHQPWRELS 405
           R PR+SD+R  Y P          P  S  PW++LS
Sbjct: 83  RPPRASDVRPSYSPTSNGAPLASRPSHSPSPWQQLS 118


>AE013599-712|AAF59045.1|  985|Drosophila melanogaster CG8740-PA,
           isoform A protein.
          Length = 985

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
 Frame = -1

Query: 500 RNPRSSDIRSRYRPV*GN----MHPKKSHQPWRELS 405
           R PR+SD+R  Y P          P  S  PW++LS
Sbjct: 83  RPPRASDVRPSYSPTSNGAPLASRPSHSPSPWQQLS 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,818,748
Number of Sequences: 53049
Number of extensions: 564327
Number of successful extensions: 1441
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1439
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)